Protein–RNA interactions for Protein: P39061

Col18a1, Collagen alpha-1(XVIII) chain, mousemouse

Predictions only

Length 1,774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col18a1P39061 Mak-201ENSMUST00000021792 3385 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Col18a1P39061 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col18a1P39061 Gm44742-201ENSMUST00000207190 1412 ntBASIC8.82□□□□□ -1
Col18a1P39061 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col18a1P39061 Scn2a-205ENSMUST00000200829 6348 ntAPPRIS ALT1 TSL 5 BASIC8.82□□□□□ -1
Col18a1P39061 Exoc2-202ENSMUST00000102946 4375 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col18a1P39061 Olfr1261-203ENSMUST00000213909 2912 ntAPPRIS P1 TSL 2 BASIC8.82□□□□□ -1
Col18a1P39061 Ect2l-201ENSMUST00000095817 2900 ntAPPRIS P2 TSL 5 BASIC8.82□□□□□ -1
Col18a1P39061 Gm13821-201ENSMUST00000202029 3201 ntBASIC8.82□□□□□ -1
Col18a1P39061 Gys2-201ENSMUST00000032371 2657 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col18a1P39061 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC8.82□□□□□ -1
Col18a1P39061 Olfr316-202ENSMUST00000215071 2719 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Col18a1P39061 Serpina7-202ENSMUST00000060824 1895 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col18a1P39061 Cnep1r1-203ENSMUST00000121097 2209 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col18a1P39061 Selenof-202ENSMUST00000106211 1178 ntTSL 3 BASIC8.82□□□□□ -1
Col18a1P39061 Gm22032-201ENSMUST00000116946 116 ntBASIC8.82□□□□□ -1
Col18a1P39061 Gm14173-201ENSMUST00000117690 278 ntBASIC8.82□□□□□ -1
Col18a1P39061 Gm13006-201ENSMUST00000118683 214 ntBASIC8.82□□□□□ -1
Col18a1P39061 Gm16200-201ENSMUST00000120385 331 ntBASIC8.82□□□□□ -1
Col18a1P39061 Sox5os3-202ENSMUST00000154167 765 ntTSL 3 BASIC8.82□□□□□ -1
Col18a1P39061 Gm22932-201ENSMUST00000175510 72 ntBASIC8.82□□□□□ -1
Col18a1P39061 Gm20917-201ENSMUST00000179922 990 ntAPPRIS P1 BASIC8.82□□□□□ -1
Col18a1P39061 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col18a1P39061 Gm38181-201ENSMUST00000181357 720 ntBASIC8.82□□□□□ -1
Col18a1P39061 Gm28080-201ENSMUST00000188552 722 ntBASIC8.82□□□□□ -1
Col18a1P39061 Gm19182-201ENSMUST00000207139 577 ntBASIC8.82□□□□□ -1
Col18a1P39061 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col18a1P39061 Gm11427-204ENSMUST00000216233 999 ntTSL 5 BASIC8.82□□□□□ -1
Col18a1P39061 CT485612.1-201ENSMUST00000222555 382 ntBASIC8.82□□□□□ -1
Col18a1P39061 n-R5s173-201ENSMUST00000082620 119 ntBASIC8.82□□□□□ -1
Col18a1P39061 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col18a1P39061 Gm20236-201ENSMUST00000193037 4540 ntBASIC8.82□□□□□ -1
Col18a1P39061 Gm37094-201ENSMUST00000193352 4540 ntBASIC8.82□□□□□ -1
Col18a1P39061 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col18a1P39061 AC159193.3-201ENSMUST00000221902 2622 ntBASIC8.82□□□□□ -1
Col18a1P39061 Elovl2-202ENSMUST00000117096 3797 ntTSL 1 (best) BASIC8.82□□□□□ -1
Col18a1P39061 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC8.82□□□□□ -1
Col18a1P39061 BC051142-202ENSMUST00000097348 1732 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Col18a1P39061 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Col18a1P39061 Htr5a-201ENSMUST00000036227 5376 ntAPPRIS P1 TSL 1 (best) BASIC8.82□□□□□ -1
Col18a1P39061 Gm839-201ENSMUST00000079186 1843 ntTSL 2 BASIC8.82□□□□□ -1
Col18a1P39061 Peg10-203ENSMUST00000176551 6567 ntTSL 2 BASIC8.82□□□□□ -1
Col18a1P39061 Gm29198-201ENSMUST00000190102 1512 ntTSL 5 BASIC8.82□□□□□ -1
Col18a1P39061 Gm2762-207ENSMUST00000202739 2665 ntBASIC8.82□□□□□ -1
Col18a1P39061 Chd2-203ENSMUST00000169922 9085 ntAPPRIS P1 TSL 5 BASIC8.82□□□□□ -1
Col18a1P39061 E030022I16Rik-201ENSMUST00000215131 2766 ntBASIC8.82□□□□□ -1
Col18a1P39061 Fam135a-208ENSMUST00000187752 5194 ntAPPRIS ALT2 TSL 5 BASIC8.82□□□□□ -1
Col18a1P39061 Adgrl2-208ENSMUST00000197567 5585 ntAPPRIS P2 TSL 2 BASIC8.82□□□□□ -1
Col18a1P39061 Kat6b-207ENSMUST00000182855 6791 ntAPPRIS P2 TSL 1 (best) BASIC8.82□□□□□ -1
Col18a1P39061 Pcdhb3-201ENSMUST00000051754 3787 ntAPPRIS P1 BASIC8.81□□□□□ -1
Col18a1P39061 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC8.81□□□□□ -1
Col18a1P39061 Gm15531-201ENSMUST00000118062 252 ntBASIC8.81□□□□□ -1
Col18a1P39061 Gm8761-201ENSMUST00000121507 955 ntBASIC8.81□□□□□ -1
Col18a1P39061 Gm11233-201ENSMUST00000122357 634 ntBASIC8.81□□□□□ -1
Col18a1P39061 Gm17198-201ENSMUST00000171792 1154 ntBASIC8.81□□□□□ -1
Col18a1P39061 Gm8895-201ENSMUST00000172300 1223 ntBASIC8.81□□□□□ -1
Col18a1P39061 Gm3605-201ENSMUST00000185858 440 ntBASIC8.81□□□□□ -1
Col18a1P39061 Gm29159-201ENSMUST00000187969 379 ntBASIC8.81□□□□□ -1
Col18a1P39061 Gm37468-201ENSMUST00000194767 854 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Gm43608-201ENSMUST00000197703 687 ntTSL 3 BASIC8.81□□□□□ -1
Col18a1P39061 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC8.81□□□□□ -1
Col18a1P39061 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC8.81□□□□□ -1
Col18a1P39061 Gm45724-201ENSMUST00000213031 420 ntBASIC8.81□□□□□ -1
Col18a1P39061 Nqo2-201ENSMUST00000021843 1063 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 AC124569.4-201ENSMUST00000223830 1220 ntBASIC8.81□□□□□ -1
Col18a1P39061 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC8.81□□□□□ -1
Col18a1P39061 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC8.81□□□□□ -1
Col18a1P39061 Zfp626-201ENSMUST00000080175 816 ntTSL 5 BASIC8.81□□□□□ -1
Col18a1P39061 Rims2-205ENSMUST00000227243 4760 ntAPPRIS ALT2 BASIC8.81□□□□□ -1
Col18a1P39061 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Col18a1P39061 Srgap3-203ENSMUST00000113169 8300 ntTSL 5 BASIC8.81□□□□□ -1
Col18a1P39061 C8a-203ENSMUST00000106808 3539 ntTSL 2 BASIC8.81□□□□□ -1
Col18a1P39061 Lgi1-204ENSMUST00000196090 1789 ntTSL 5 BASIC8.81□□□□□ -1
Col18a1P39061 Sycp1-202ENSMUST00000196988 3189 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Gm38325-201ENSMUST00000194507 1377 ntBASIC8.81□□□□□ -1
Col18a1P39061 Tmcc3-202ENSMUST00000117460 3217 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Gm43681-201ENSMUST00000201581 1903 ntBASIC8.81□□□□□ -1
Col18a1P39061 Calhm2-202ENSMUST00000140512 3377 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Pramel5-202ENSMUST00000105752 2060 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Col18a1P39061 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Olfr686-202ENSMUST00000214147 2646 ntAPPRIS P1 TSL 5 BASIC8.81□□□□□ -1
Col18a1P39061 Slc5a6-201ENSMUST00000080431 3218 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Fam214a-201ENSMUST00000081746 3795 ntAPPRIS P4 TSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Zfp608-201ENSMUST00000064763 6112 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Nol8-209ENSMUST00000223467 4765 ntAPPRIS ALT2 TSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Tmem106b-201ENSMUST00000031556 6002 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Atp13a4-208ENSMUST00000182627 4238 ntAPPRIS P3 TSL 5 BASIC8.81□□□□□ -1
Col18a1P39061 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Gm14819-201ENSMUST00000101645 928 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Gm10486-201ENSMUST00000101647 924 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Gm14632-201ENSMUST00000101654 864 ntAPPRIS P1 TSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Gm11622-201ENSMUST00000120525 691 ntBASIC8.81□□□□□ -1
Col18a1P39061 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Stk-ps1-201ENSMUST00000173340 1074 ntBASIC8.81□□□□□ -1
Col18a1P39061 Gm37231-201ENSMUST00000191716 621 ntTSL 1 (best) BASIC8.81□□□□□ -1
Col18a1P39061 Gm37024-201ENSMUST00000192224 868 ntBASIC8.81□□□□□ -1
Col18a1P39061 Gm38159-202ENSMUST00000194145 621 ntTSL 5 BASIC8.81□□□□□ -1
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms