Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Olfr686-203ENSMUST00000216143 2612 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Col2a1P28481 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col2a1P28481 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col2a1P28481 Kansl1-203ENSMUST00000106971 5222 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Col2a1P28481 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Col2a1P28481 Vmn1r50-202ENSMUST00000089417 2059 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
Col2a1P28481 CAAA01119292.1-201ENSMUST00000226763 2766 ntBASIC7.54□□□□□ -1.2
Col2a1P28481 Trim30b-204ENSMUST00000164410 3042 ntAPPRIS P5 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col2a1P28481 Nsun6-202ENSMUST00000076435 3042 ntAPPRIS P3 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col2a1P28481 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col2a1P28481 Olfr1278-206ENSMUST00000216229 6819 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Col2a1P28481 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col2a1P28481 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC7.54□□□□□ -1.2
Col2a1P28481 Cyp1a1-201ENSMUST00000034865 2621 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col2a1P28481 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col2a1P28481 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col2a1P28481 Gm37948-201ENSMUST00000192846 2169 ntTSL 5 BASIC7.54□□□□□ -1.2
Col2a1P28481 Gm10610-202ENSMUST00000207184 2693 ntTSL 5 BASIC7.54□□□□□ -1.2
Col2a1P28481 Wdr63-201ENSMUST00000160285 3176 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col2a1P28481 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Col2a1P28481 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col2a1P28481 Gm13400-201ENSMUST00000117436 380 ntBASIC7.54□□□□□ -1.2
Col2a1P28481 Gm11256-201ENSMUST00000118109 829 ntBASIC7.54□□□□□ -1.2
Col2a1P28481 Gm4789-201ENSMUST00000121708 1216 ntBASIC7.54□□□□□ -1.2
Col2a1P28481 Gm12518-201ENSMUST00000122075 779 ntBASIC7.54□□□□□ -1.2
Col2a1P28481 Gm26023-201ENSMUST00000122722 313 ntBASIC7.54□□□□□ -1.2
Col2a1P28481 Gm16346-201ENSMUST00000129158 937 ntTSL 5 BASIC7.54□□□□□ -1.2
Col2a1P28481 Gm14640-201ENSMUST00000145800 437 ntTSL 5 BASIC7.54□□□□□ -1.2
Col2a1P28481 Gm25117-201ENSMUST00000157194 144 ntBASIC7.54□□□□□ -1.2
Col2a1P28481 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC7.54□□□□□ -1.2
Col2a1P28481 Gm18833-201ENSMUST00000173218 862 ntBASIC7.54□□□□□ -1.2
Col2a1P28481 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC7.54□□□□□ -1.2
Col2a1P28481 2610027F03Rik-201ENSMUST00000185443 530 ntTSL 5 BASIC7.54□□□□□ -1.2
Col2a1P28481 Gm28253-201ENSMUST00000186071 712 ntTSL 5 BASIC7.54□□□□□ -1.2
Col2a1P28481 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC7.54□□□□□ -1.2
Col2a1P28481 Gm18799-201ENSMUST00000189104 913 ntBASIC7.54□□□□□ -1.2
Col2a1P28481 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC7.54□□□□□ -1.2
Col2a1P28481 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC7.54□□□□□ -1.2
Col2a1P28481 4930480K02Rik-201ENSMUST00000203679 1054 ntBASIC7.54□□□□□ -1.2
Col2a1P28481 Gm44075-201ENSMUST00000204208 216 ntBASIC7.54□□□□□ -1.2
Col2a1P28481 Gm4083-201ENSMUST00000207158 451 ntBASIC7.54□□□□□ -1.2
Col2a1P28481 Gm31172-201ENSMUST00000210068 321 ntTSL 3 BASIC7.54□□□□□ -1.2
Col2a1P28481 AC166352.1-201ENSMUST00000215483 1105 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Col2a1P28481 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC7.54□□□□□ -1.2
Col2a1P28481 AC161252.1-201ENSMUST00000225536 467 ntBASIC7.54□□□□□ -1.2
Col2a1P28481 Gm4792-201ENSMUST00000065826 771 ntAPPRIS P1 TSL 2 BASIC7.54□□□□□ -1.2
Col2a1P28481 Olfr771-201ENSMUST00000078914 954 ntAPPRIS P1 BASIC7.54□□□□□ -1.2
Col2a1P28481 Rpl23a-ps1-201ENSMUST00000085632 465 ntBASIC7.54□□□□□ -1.2
Col2a1P28481 Srek1ip1-201ENSMUST00000022230 2365 ntAPPRIS P1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col2a1P28481 Acox1-202ENSMUST00000072948 3743 ntAPPRIS ALT1 TSL 1 (best) BASIC7.54□□□□□ -1.2
Col2a1P28481 Gm10032-201ENSMUST00000071522 1887 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Col2a1P28481 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC7.54□□□□□ -1.2
Col2a1P28481 Gm26606-201ENSMUST00000181292 2439 ntTSL 1 (best) BASIC7.54□□□□□ -1.2
Col2a1P28481 Rslcan18-201ENSMUST00000091526 2981 ntAPPRIS P1 TSL 5 BASIC7.54□□□□□ -1.2
Col2a1P28481 Gm38366-201ENSMUST00000193127 1934 ntBASIC7.53□□□□□ -1.2
Col2a1P28481 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col2a1P28481 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col2a1P28481 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col2a1P28481 Zscan4e-201ENSMUST00000166753 1722 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Col2a1P28481 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Col2a1P28481 Slfn5-201ENSMUST00000067443 5979 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col2a1P28481 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col2a1P28481 Gm44185-201ENSMUST00000204539 3307 ntBASIC7.53□□□□□ -1.2
Col2a1P28481 Gm44215-201ENSMUST00000204910 2711 ntBASIC7.53□□□□□ -1.2
Col2a1P28481 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col2a1P28481 1520401A03Rik-204ENSMUST00000178006 3726 ntAPPRIS ALT2 TSL 2 BASIC7.53□□□□□ -1.2
Col2a1P28481 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Col2a1P28481 Gm6093-202ENSMUST00000222963 2163 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col2a1P28481 Etv5-203ENSMUST00000168774 3773 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col2a1P28481 Igkv6-14-201ENSMUST00000103394 347 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col2a1P28481 Snora35-201ENSMUST00000104579 128 ntBASIC7.53□□□□□ -1.2
Col2a1P28481 Gm22374-201ENSMUST00000104583 132 ntBASIC7.53□□□□□ -1.2
Col2a1P28481 Gm8692-201ENSMUST00000118102 438 ntBASIC7.53□□□□□ -1.2
Col2a1P28481 Gad1os-201ENSMUST00000151851 889 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col2a1P28481 Gm26410-201ENSMUST00000157670 261 ntBASIC7.53□□□□□ -1.2
Col2a1P28481 Gm21542-201ENSMUST00000182307 993 ntBASIC7.53□□□□□ -1.2
Col2a1P28481 Gm43392-201ENSMUST00000196560 434 ntBASIC7.53□□□□□ -1.2
Col2a1P28481 Gm2225-201ENSMUST00000209570 377 ntBASIC7.53□□□□□ -1.2
Col2a1P28481 AC126685.1-201ENSMUST00000221001 121 ntBASIC7.53□□□□□ -1.2
Col2a1P28481 Cma2-202ENSMUST00000228263 857 ntBASIC7.53□□□□□ -1.2
Col2a1P28481 Olfr1122-201ENSMUST00000056435 1080 ntAPPRIS P1 BASIC7.53□□□□□ -1.2
Col2a1P28481 Pi4ka-201ENSMUST00000036161 6431 ntAPPRIS P1 TSL 1 (best) BASIC7.53□□□□□ -1.2
Col2a1P28481 Olfr60-202ENSMUST00000210932 2383 ntAPPRIS P1 TSL 2 BASIC7.53□□□□□ -1.2
Col2a1P28481 9330158H04Rik-206ENSMUST00000161161 3103 ntTSL 1 (best) BASIC7.53□□□□□ -1.2
Col2a1P28481 Gm37169-201ENSMUST00000195599 4161 ntBASIC7.53□□□□□ -1.2
Col2a1P28481 Myof-211ENSMUST00000226068 6633 ntAPPRIS ALT2 BASIC7.53□□□□□ -1.2
Col2a1P28481 Frem1-208ENSMUST00000170248 9527 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Col2a1P28481 Gm45464-201ENSMUST00000210728 2844 ntTSL 5 BASIC7.53□□□□□ -1.2
Col2a1P28481 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC7.53□□□□□ -1.2
Col2a1P28481 Olfr523-206ENSMUST00000216023 3940 ntAPPRIS ALT2 TSL 5 BASIC7.53□□□□□ -1.2
Col2a1P28481 AC098728.1-202ENSMUST00000226656 2198 ntBASIC7.52□□□□□ -1.2
Col2a1P28481 Slc7a14-201ENSMUST00000091259 8897 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.2
Col2a1P28481 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
Col2a1P28481 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col2a1P28481 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Col2a1P28481 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Col2a1P28481 Cux1-201ENSMUST00000004097 12862 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col2a1P28481 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
Col2a1P28481 Slc4a8-201ENSMUST00000023776 11790 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
Col2a1P28481 Nlgn3-202ENSMUST00000118111 8004 ntTSL 5 BASIC7.52□□□□□ -1.21
Retrieved 100 of 76,532 protein–RNA pairs in 56 ms