Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Prg4-208ENSMUST00000164600 4263 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Tet1-206ENSMUST00000174189 14369 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Odam-202ENSMUST00000129757 1370 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Gm37100-201ENSMUST00000193344 1353 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Kcnma1-208ENSMUST00000177634 4605 ntTSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sdc1P18828 Gm4927-201ENSMUST00000219548 1318 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm37769-201ENSMUST00000193753 2369 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Fsbp-201ENSMUST00000180239 4358 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sdc1P18828 Igkv1-117-201ENSMUST00000103317 404 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sdc1P18828 n-R5s51-201ENSMUST00000104473 123 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm2237-201ENSMUST00000112595 471 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sdc1P18828 Gm12944-201ENSMUST00000119262 463 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm14990-201ENSMUST00000122354 445 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm16150-201ENSMUST00000127620 437 ntTSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Gm15902-201ENSMUST00000146949 469 ntTSL 3 BASIC5.33□□□□□ -1.56
Sdc1P18828 Gm22811-201ENSMUST00000157468 154 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm24286-201ENSMUST00000157632 128 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm17122-201ENSMUST00000166047 372 ntTSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Gypc-201ENSMUST00000172434 612 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Gm20529-201ENSMUST00000173683 203 ntTSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 1700039M10Rik-201ENSMUST00000180397 532 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sdc1P18828 Gm18848-201ENSMUST00000182069 792 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm28281-201ENSMUST00000185658 187 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm8502-201ENSMUST00000185708 901 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm28958-201ENSMUST00000185864 703 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm21147-201ENSMUST00000186046 913 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm8506-201ENSMUST00000186661 829 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm8870-201ENSMUST00000188170 775 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm29508-202ENSMUST00000191414 710 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sdc1P18828 Gm8101-201ENSMUST00000192796 478 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 1700102P08Rik-202ENSMUST00000192995 658 ntTSL 3 BASIC5.33□□□□□ -1.56
Sdc1P18828 Gm38047-201ENSMUST00000193690 1133 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC5.33□□□□□ -1.56
Sdc1P18828 Gm24826-202ENSMUST00000197298 216 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Gm43558-201ENSMUST00000200155 210 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm7542-201ENSMUST00000201140 777 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm5305-201ENSMUST00000204010 746 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC5.33□□□□□ -1.56
Sdc1P18828 Gm18207-201ENSMUST00000205486 526 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm3198-201ENSMUST00000208725 1026 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm17997-201ENSMUST00000211801 840 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 AC119987.1-201ENSMUST00000212316 848 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 4933432G23Rik-201ENSMUST00000213675 840 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sdc1P18828 Gm7780-201ENSMUST00000214787 406 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 CT030166.4-201ENSMUST00000220640 404 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 AC122327.2-201ENSMUST00000220883 120 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 AC122327.3-201ENSMUST00000221852 120 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 AC150661.1-201ENSMUST00000222563 495 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 AC166341.1-201ENSMUST00000223360 105 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Zfp389-202ENSMUST00000224437 1234 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 AC160109.1-201ENSMUST00000225592 729 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 AC166822.1-201ENSMUST00000227667 636 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Tmem213-201ENSMUST00000031851 631 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sdc1P18828 Rasgrf1-201ENSMUST00000034909 853 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Sdc1P18828 Olfr124-201ENSMUST00000053599 1122 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sdc1P18828 Olfr1342-201ENSMUST00000060562 1002 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sdc1P18828 Olfr419-201ENSMUST00000061990 1088 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sdc1P18828 Olfr888-201ENSMUST00000075228 945 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm7808-201ENSMUST00000082002 387 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm6304-201ENSMUST00000096579 447 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Sdc1P18828 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sdc1P18828 Olfr1311-203ENSMUST00000215321 2667 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 AC120375.1-201ENSMUST00000227034 3612 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm38124-201ENSMUST00000191710 2581 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Samd8-202ENSMUST00000119430 6801 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
Sdc1P18828 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Gm42520-201ENSMUST00000199642 1502 ntBASIC5.33□□□□□ -1.56
Sdc1P18828 Olfr51-202ENSMUST00000213415 2819 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Sdc1P18828 Tdrkh-207ENSMUST00000197901 2652 ntAPPRIS P2 TSL 5 BASIC5.32□□□□□ -1.56
Sdc1P18828 Zim1-202ENSMUST00000122432 3060 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sdc1P18828 Csde1-214ENSMUST00000199240 3457 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Sdc1P18828 Slc35a5-201ENSMUST00000023344 4233 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Sdc1P18828 Gm5415-201ENSMUST00000171322 3609 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sdc1P18828 Gm44416-201ENSMUST00000204055 2066 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Gm44697-201ENSMUST00000207756 1679 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC5.32□□□□□ -1.56
Sdc1P18828 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Sdc1P18828 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC5.32□□□□□ -1.56
Sdc1P18828 Olfr1155-202ENSMUST00000214641 2048 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Sdc1P18828 Kcnma1-209ENSMUST00000179097 4596 ntTSL 5 BASIC5.32□□□□□ -1.56
Sdc1P18828 Igkv14-126-201ENSMUST00000103310 358 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Sdc1P18828 Gm23358-201ENSMUST00000103887 110 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Gm23701-201ENSMUST00000103893 110 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Gm13679-201ENSMUST00000118678 484 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Gm12875-201ENSMUST00000118745 344 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Gm13604-201ENSMUST00000119332 482 ntBASIC5.32□□□□□ -1.56
Sdc1P18828 Gm12133-201ENSMUST00000121775 661 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 70 ms