Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Olfr1198-201ENSMUST00000099814 927 ntAPPRIS P1 BASIC5.51□□□□□ -1.53
Cdx1P18111 Skint7-201ENSMUST00000055014 1788 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 Shroom4-201ENSMUST00000089520 8201 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 Gm14667-201ENSMUST00000119448 1350 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Gm17021-202ENSMUST00000214413 2371 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 Olfr237-ps1-203ENSMUST00000216411 4115 ntAPPRIS P1 TSL 5 BASIC5.51□□□□□ -1.53
Cdx1P18111 AC166159.1-201ENSMUST00000227154 1380 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 Pias1-201ENSMUST00000098651 5564 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 Ncoa2-203ENSMUST00000081713 8171 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 Catsperg1-201ENSMUST00000047846 3566 ntTSL 5 BASIC5.51□□□□□ -1.53
Cdx1P18111 C630031E19Rik-201ENSMUST00000218114 3059 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
Cdx1P18111 Gm14035-201ENSMUST00000117596 1475 ntBASIC5.51□□□□□ -1.53
Cdx1P18111 Sorbs2-231ENSMUST00000171337 5651 ntAPPRIS P4 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 Gm42892-201ENSMUST00000196227 3973 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 4930553P18Rik-201ENSMUST00000201164 1659 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 Gm43176-201ENSMUST00000199653 2989 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Rnf146-205ENSMUST00000162335 1434 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC5.5□□□□□ -1.53
Cdx1P18111 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 Nxf7-201ENSMUST00000033784 1863 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 Shoc2-202ENSMUST00000169861 4065 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 Slc24a2-204ENSMUST00000107158 10499 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 Gm37775-201ENSMUST00000194120 2313 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Cdx1P18111 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC5.5□□□□□ -1.53
Cdx1P18111 Crnn-201ENSMUST00000107300 1628 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Cdx1P18111 Trappc1-204ENSMUST00000108662 635 ntTSL 2 BASIC5.5□□□□□ -1.53
Cdx1P18111 Gm11945-201ENSMUST00000120551 476 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Olfr1379-ps1-201ENSMUST00000120726 1001 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Gm15362-201ENSMUST00000121459 388 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Rps12-ps1-201ENSMUST00000121980 401 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Gm12590-201ENSMUST00000134226 404 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 Gm15882-201ENSMUST00000161344 855 ntTSL 3 BASIC5.5□□□□□ -1.53
Cdx1P18111 Gm4340-201ENSMUST00000163113 807 ntAPPRIS ALT2 BASIC5.5□□□□□ -1.53
Cdx1P18111 Gm17223-201ENSMUST00000171413 481 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Gm7651-201ENSMUST00000173398 901 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Vmn2r-ps37-201ENSMUST00000174682 1044 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Gm20690-201ENSMUST00000177341 315 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 1700066J03Rik-201ENSMUST00000181908 444 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 Mir6409-201ENSMUST00000184957 92 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Gm28363-201ENSMUST00000186341 673 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Cdx1P18111 1700112H15Rik-201ENSMUST00000188766 778 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 Gm28665-201ENSMUST00000189269 670 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Gm29562-201ENSMUST00000190113 904 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Gm28294-201ENSMUST00000191154 386 ntTSL 2 BASIC5.5□□□□□ -1.53
Cdx1P18111 B230112G18Rik-201ENSMUST00000192979 851 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Gm2979-201ENSMUST00000193442 463 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Ighv8-15-201ENSMUST00000197770 294 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Gm43203-201ENSMUST00000200130 558 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Spin2g-202ENSMUST00000203586 1016 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 Gm44722-201ENSMUST00000206473 436 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Gm8168-201ENSMUST00000209631 948 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Gm4668-201ENSMUST00000214742 943 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 AC163296.1-202ENSMUST00000218395 661 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 AC163296.1-201ENSMUST00000220004 1266 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Gm40271-201ENSMUST00000221752 422 ntTSL 3 BASIC5.5□□□□□ -1.53
Cdx1P18111 4933413J09Rik-201ENSMUST00000022427 899 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 AC154747.4-201ENSMUST00000224802 903 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 AC154461.4-201ENSMUST00000224878 468 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 AC164618.1-201ENSMUST00000225769 592 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 AC113269.1-201ENSMUST00000227185 674 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Ssbp1-201ENSMUST00000031971 1063 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Cdx1P18111 Olfr161-201ENSMUST00000061541 942 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
Cdx1P18111 Gm7808-201ENSMUST00000082002 387 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 BC080695-202ENSMUST00000105774 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 Cntn3-202ENSMUST00000203619 5294 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 AC158232.1-202ENSMUST00000218352 3343 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
Cdx1P18111 Olfr1065-204ENSMUST00000217586 2174 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Cdx1P18111 AC153143.2-201ENSMUST00000220999 1804 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Cdx1P18111 Tmem182-201ENSMUST00000114765 2716 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 4930447M23Rik-202ENSMUST00000141289 1483 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 Gm29555-201ENSMUST00000188620 1497 ntTSL 5 BASIC5.5□□□□□ -1.53
Cdx1P18111 Trim5-201ENSMUST00000051795 1467 ntAPPRIS ALT2 TSL 5 BASIC5.5□□□□□ -1.53
Cdx1P18111 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
Cdx1P18111 Gm26945-201ENSMUST00000183191 2011 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Gm43023-201ENSMUST00000197583 2106 ntBASIC5.5□□□□□ -1.53
Cdx1P18111 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 Gm4876-203ENSMUST00000139701 2225 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 Gm44827-201ENSMUST00000207963 2229 ntTSL 5 BASIC5.5□□□□□ -1.53
Cdx1P18111 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC5.5□□□□□ -1.53
Cdx1P18111 Gm11758-202ENSMUST00000107327 1325 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 Gm45949-201ENSMUST00000221550 1895 ntTSL 5 BASIC5.49□□□□□ -1.53
Cdx1P18111 Ankfy1-206ENSMUST00000155998 8030 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 Il21-201ENSMUST00000029273 3072 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 Gm45634-201ENSMUST00000209736 1990 ntBASIC5.49□□□□□ -1.53
Cdx1P18111 Gm17654-201ENSMUST00000166110 1403 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cdx1P18111 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
Cdx1P18111 Nlrc4-201ENSMUST00000052124 3838 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 Gabrb2-205ENSMUST00000192403 1539 ntAPPRIS ALT1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 Olfr131-204ENSMUST00000216523 1714 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
Cdx1P18111 Zfp9-201ENSMUST00000161170 3968 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 A730081D07Rik-201ENSMUST00000153685 1804 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
Cdx1P18111 Gm42969-201ENSMUST00000199858 3631 ntBASIC5.49□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms