Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 4930448K20Rik-201ENSMUST00000120570 998 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Gm11370-201ENSMUST00000120583 260 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Gm12175-201ENSMUST00000122081 345 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Mir1900-201ENSMUST00000122714 78 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Gm16093-201ENSMUST00000141455 392 ntTSL 5 BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Gm20530-201ENSMUST00000174261 254 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Gm24812-201ENSMUST00000175315 284 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Gm5272-201ENSMUST00000182730 982 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Gm37065-201ENSMUST00000191636 444 ntTSL 2 BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Gm7019-201ENSMUST00000194122 369 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Gm42708-201ENSMUST00000196332 905 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Gm4860-201ENSMUST00000200368 454 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Gm5154-201ENSMUST00000203971 399 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Cd209d-202ENSMUST00000209176 672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Aldoa-ps4-201ENSMUST00000216332 753 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 AC154380.1-201ENSMUST00000226804 720 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Prl3d1-201ENSMUST00000082079 872 ntAPPRIS ALT2 TSL 1 (best) BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Olfr633-201ENSMUST00000098188 939 ntAPPRIS P1 BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Gm5175-201ENSMUST00000218458 1703 ntTSL 5 BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 AC152922.2-201ENSMUST00000213353 3879 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Olfr959-203ENSMUST00000216298 5616 ntAPPRIS P1 TSL 5 BASIC7.57□□□□□ -1.2
Smc1aQ9CU62 A130050O07Rik-201ENSMUST00000191963 3023 ntBASIC7.57□□□□□ -1.2
Smc1aQ9CU62 Tpx2-207ENSMUST00000178997 4161 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm37138-201ENSMUST00000194564 2089 ntBASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Zfp37-205ENSMUST00000221329 1776 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Sin3a-201ENSMUST00000049169 4845 ntAPPRIS P3 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Pln-201ENSMUST00000046221 2334 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 AC122769.1-201ENSMUST00000226930 1714 ntBASIC7.56□□□□□ -1.2
Smc1aQ9CU62 AC116950.1-201ENSMUST00000226322 3250 ntBASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm22774-201ENSMUST00000102084 109 ntBASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm16073-201ENSMUST00000116032 517 ntBASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm13196-201ENSMUST00000118297 379 ntBASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm5601-201ENSMUST00000118909 972 ntBASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm22275-201ENSMUST00000122470 310 ntBASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm11267-201ENSMUST00000137477 1071 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm4202-201ENSMUST00000169025 733 ntBASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm4340-202ENSMUST00000181036 1197 ntAPPRIS ALT2 TSL 3 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm28443-201ENSMUST00000189081 698 ntBASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm43400-201ENSMUST00000197294 1254 ntTSL 5 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Ighv1-83-201ENSMUST00000199643 351 ntBASIC7.56□□□□□ -1.2
Smc1aQ9CU62 D530018E20Rik-201ENSMUST00000205107 958 ntBASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm45739-201ENSMUST00000213094 388 ntBASIC7.56□□□□□ -1.2
Smc1aQ9CU62 CT030709.2-201ENSMUST00000215521 399 ntTSL 5 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm40797-201ENSMUST00000219762 385 ntTSL 2 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 4933412O06Rik-201ENSMUST00000222681 1123 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 AC091783.3-201ENSMUST00000223969 681 ntBASIC7.56□□□□□ -1.2
Smc1aQ9CU62 AV026068-219ENSMUST00000224148 933 ntBASIC7.56□□□□□ -1.2
Smc1aQ9CU62 AC121997.2-202ENSMUST00000227158 939 ntBASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Tipin-201ENSMUST00000034964 1211 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Tas2r144-201ENSMUST00000063489 960 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Vmn1r53-201ENSMUST00000076086 1122 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm5528-201ENSMUST00000076314 480 ntBASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm8444-201ENSMUST00000092020 357 ntAPPRIS P1 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Slx-201ENSMUST00000096913 925 ntAPPRIS P1 TSL 5 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Stat4-202ENSMUST00000168302 2662 ntAPPRIS P1 TSL 1 (best) BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Zfp708-202ENSMUST00000109743 2536 ntAPPRIS ALT2 TSL 2 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Scn1a-201ENSMUST00000077489 8116 ntAPPRIS P3 TSL 5 BASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm18310-201ENSMUST00000206494 3912 ntBASIC7.56□□□□□ -1.2
Smc1aQ9CU62 Gm5361-201ENSMUST00000211041 1498 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm5454-201ENSMUST00000052030 1453 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Zfp459-201ENSMUST00000056470 3334 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm43335-201ENSMUST00000198299 3276 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 AC116476.1-201ENSMUST00000226274 2318 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm13400-201ENSMUST00000117436 380 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm22024-201ENSMUST00000122733 287 ntBASIC7.55□□□□□ -1.2
Smc1aQ9CU62 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC7.55□□□□□ -1.2
Retrieved 100 of 76,532 protein–RNA pairs in 83.8 ms