Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Olfr976-201ENSMUST00000169307 2813 ntAPPRIS P2 BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Mug-ps1-202ENSMUST00000189975 3293 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Tex11-201ENSMUST00000009814 3250 ntAPPRIS P3 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Psg17-201ENSMUST00000004655 2100 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Olfr645-201ENSMUST00000057104 3677 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm43410-201ENSMUST00000197510 2234 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 B130024G19Rik-203ENSMUST00000190320 5451 ntTSL 5 BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Zfp143-205ENSMUST00000211798 2631 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Lrtm1-201ENSMUST00000055662 7321 ntAPPRIS P2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Olfr1410-203ENSMUST00000217316 7927 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm12789-201ENSMUST00000106914 883 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm11271-201ENSMUST00000116054 440 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm11920-201ENSMUST00000118491 563 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Rps12-ps16-201ENSMUST00000118529 399 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm12135-201ENSMUST00000119170 466 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm12754-201ENSMUST00000121908 454 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 1700025D23Rik-201ENSMUST00000129365 846 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm11820-201ENSMUST00000139614 664 ntTSL 3 BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm13373-201ENSMUST00000144634 655 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm17217-201ENSMUST00000166613 469 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Rps12-ps13-201ENSMUST00000178365 399 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm2916-201ENSMUST00000178392 384 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Rps12-ps11-201ENSMUST00000178427 399 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Rps12-ps12-201ENSMUST00000179020 399 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Rps12-ps17-201ENSMUST00000179067 399 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Rps12-ps6-201ENSMUST00000179239 399 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Rps12-ps14-201ENSMUST00000179356 399 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Rps12-ps18-201ENSMUST00000179420 399 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Rps12-ps15-201ENSMUST00000179567 399 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm10410-201ENSMUST00000180138 384 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm26898-201ENSMUST00000181678 384 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Rps12l1-201ENSMUST00000183090 399 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm8524-201ENSMUST00000186232 379 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm43762-201ENSMUST00000201521 295 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm8637-201ENSMUST00000212919 1085 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm30676-202ENSMUST00000214464 793 ntTSL 5 BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Tgm4-206ENSMUST00000215247 951 ntTSL 2 BASIC5.87□□□□□ -1.47
Nkx3-1P97436 AC164881.1-201ENSMUST00000215648 664 ntTSL 3 BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm18586-201ENSMUST00000217265 518 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm6575-201ENSMUST00000222946 697 ntBASIC5.87□□□□□ -1.47
Nkx3-1P97436 Glrp1-201ENSMUST00000067625 1957 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Mbd3l2-202ENSMUST00000213777 2116 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Snx10-207ENSMUST00000179365 2464 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Cntn4-204ENSMUST00000113260 2531 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Lmbrd2-204ENSMUST00000227556 8099 ntAPPRIS P1 BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Sin3a-204ENSMUST00000167715 4961 ntAPPRIS P3 TSL 5 BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Olfr167-202ENSMUST00000214315 7435 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Nkx3-1P97436 Gm5431-202ENSMUST00000109210 2971 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Olfr1555-ps1-201ENSMUST00000207679 2791 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Gm37138-201ENSMUST00000194564 2089 ntBASIC5.86□□□□□ -1.47
Nkx3-1P97436 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Gm8276-201ENSMUST00000192231 1812 ntBASIC5.86□□□□□ -1.47
Nkx3-1P97436 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Olfr770-204ENSMUST00000204712 1460 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Vmn1r59-201ENSMUST00000074132 1439 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Gm15789-201ENSMUST00000118992 1359 ntBASIC5.86□□□□□ -1.47
Nkx3-1P97436 Gm38277-201ENSMUST00000195172 1367 ntBASIC5.86□□□□□ -1.47
Nkx3-1P97436 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Kat6a-202ENSMUST00000110696 9041 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Gm21719-201ENSMUST00000115940 693 ntAPPRIS P1 BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Gm5793-201ENSMUST00000119393 630 ntBASIC5.86□□□□□ -1.47
Nkx3-1P97436 Sms-ps-201ENSMUST00000121773 1101 ntBASIC5.86□□□□□ -1.47
Nkx3-1P97436 Gm12088-201ENSMUST00000137364 520 ntTSL 2 BASIC5.86□□□□□ -1.47
Nkx3-1P97436 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Gm22523-201ENSMUST00000158696 100 ntBASIC5.86□□□□□ -1.47
Nkx3-1P97436 Tmbim6-203ENSMUST00000159531 939 ntAPPRIS P1 TSL 5 BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Gm25244-201ENSMUST00000178089 132 ntBASIC5.86□□□□□ -1.47
Nkx3-1P97436 Gm27602-201ENSMUST00000183861 111 ntBASIC5.86□□□□□ -1.47
Nkx3-1P97436 Gm28023-201ENSMUST00000184556 60 ntBASIC5.86□□□□□ -1.47
Nkx3-1P97436 Gm27825-201ENSMUST00000184586 60 ntBASIC5.86□□□□□ -1.47
Nkx3-1P97436 Gm28413-201ENSMUST00000189369 291 ntBASIC5.86□□□□□ -1.47
Nkx3-1P97436 Gm6074-201ENSMUST00000193340 451 ntBASIC5.86□□□□□ -1.47
Nkx3-1P97436 Gm37223-206ENSMUST00000195070 699 ntTSL 3 BASIC5.86□□□□□ -1.47
Nkx3-1P97436 AC157085.1-201ENSMUST00000216343 162 ntBASIC5.86□□□□□ -1.47
Nkx3-1P97436 AC154806.1-203ENSMUST00000227370 1032 ntBASIC5.86□□□□□ -1.47
Nkx3-1P97436 Dpm2-201ENSMUST00000028151 869 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC5.86□□□□□ -1.47
Nkx3-1P97436 Gm25587-201ENSMUST00000082498 166 ntBASIC5.86□□□□□ -1.47
Nkx3-1P97436 Gm24032-201ENSMUST00000083932 159 ntBASIC5.86□□□□□ -1.47
Nkx3-1P97436 Tppp2-201ENSMUST00000008957 742 ntAPPRIS P1 TSL 1 (best) BASIC5.86□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms