Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Rab43-201ENSMUST00000032134 4308 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Pzp-201ENSMUST00000112132 4681 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Gm37686-201ENSMUST00000194099 2309 ntBASIC4.4□□□□□ -1.7
PrkdcP97313 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Lrba-204ENSMUST00000194759 9379 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Ganab-201ENSMUST00000096246 3862 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Irgm2-203ENSMUST00000209079 3528 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.7
PrkdcP97313 Gm13322-201ENSMUST00000152803 246 ntTSL 5 BASIC4.4□□□□□ -1.7
PrkdcP97313 Gm18849-201ENSMUST00000189861 560 ntBASIC4.4□□□□□ -1.7
PrkdcP97313 Gm37631-201ENSMUST00000192275 364 ntBASIC4.4□□□□□ -1.7
PrkdcP97313 CT009713.5-201ENSMUST00000224508 909 ntBASIC4.4□□□□□ -1.7
PrkdcP97313 Uqcrh-ps1-201ENSMUST00000038391 270 ntBASIC4.4□□□□□ -1.7
PrkdcP97313 9630028B13Rik-201ENSMUST00000143787 3406 ntTSL 2 BASIC4.4□□□□□ -1.7
PrkdcP97313 Gm44229-201ENSMUST00000203211 2487 ntBASIC4.4□□□□□ -1.7
PrkdcP97313 Zscan18-203ENSMUST00000210650 3668 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.7
PrkdcP97313 Akap6-202ENSMUST00000219786 4564 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Kcna2-201ENSMUST00000038695 11582 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Sh3pxd2b-201ENSMUST00000038753 7413 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.7
PrkdcP97313 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PrkdcP97313 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PrkdcP97313 Itgb4-204ENSMUST00000106460 5919 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
PrkdcP97313 Serpina3c-201ENSMUST00000085050 2213 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PrkdcP97313 Ablim1-203ENSMUST00000104902 5907 ntTSL 5 BASIC4.4□□□□□ -1.71
PrkdcP97313 Ncor2-201ENSMUST00000055256 7780 ntAPPRIS ALT2 TSL 2 BASIC4.4□□□□□ -1.71
PrkdcP97313 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC4.4□□□□□ -1.71
PrkdcP97313 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PrkdcP97313 Ddb1-201ENSMUST00000025649 4155 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PrkdcP97313 A730082K24Rik-203ENSMUST00000205913 1808 ntTSL 2 BASIC4.4□□□□□ -1.71
PrkdcP97313 Gm14173-201ENSMUST00000117690 278 ntBASIC4.4□□□□□ -1.71
PrkdcP97313 Gm25427-201ENSMUST00000157605 103 ntBASIC4.4□□□□□ -1.71
PrkdcP97313 Vmn1r116-201ENSMUST00000164288 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PrkdcP97313 Gm8358-201ENSMUST00000167222 555 ntBASIC4.4□□□□□ -1.71
PrkdcP97313 Vmn1r152-201ENSMUST00000168326 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PrkdcP97313 Vmn1r95-201ENSMUST00000168984 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PrkdcP97313 Vmn1r104-201ENSMUST00000169689 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PrkdcP97313 Pkib-211ENSMUST00000177473 525 ntAPPRIS P1 TSL 3 BASIC4.4□□□□□ -1.71
PrkdcP97313 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PrkdcP97313 Vmn1r148-201ENSMUST00000177774 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PrkdcP97313 Vmn1r100-201ENSMUST00000177815 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PrkdcP97313 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PrkdcP97313 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PrkdcP97313 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PrkdcP97313 Trav12n-3-201ENSMUST00000179583 353 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PrkdcP97313 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PrkdcP97313 Gm3650-201ENSMUST00000180600 747 ntBASIC4.4□□□□□ -1.71
PrkdcP97313 Gm27972-201ENSMUST00000184720 137 ntBASIC4.4□□□□□ -1.71
PrkdcP97313 Vmn1r125-201ENSMUST00000098739 924 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PrkdcP97313 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PrkdcP97313 AC122357.3-201ENSMUST00000221260 2293 ntBASIC4.4□□□□□ -1.71
PrkdcP97313 Zfp661-203ENSMUST00000110368 2981 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PrkdcP97313 Tmem229b-202ENSMUST00000070174 3656 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PrkdcP97313 Mbnl1-211ENSMUST00000192807 2906 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PrkdcP97313 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PrkdcP97313 Egf-201ENSMUST00000029653 4761 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PrkdcP97313 Zfp51-201ENSMUST00000039577 2600 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PrkdcP97313 Glmp-209ENSMUST00000177005 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PrkdcP97313 Ska2-201ENSMUST00000020794 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PrkdcP97313 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PrkdcP97313 Gm12333-201ENSMUST00000155508 2669 ntTSL 3 BASIC4.4□□□□□ -1.71
PrkdcP97313 Cntrl-206ENSMUST00000113037 5970 ntTSL 5 BASIC4.4□□□□□ -1.71
PrkdcP97313 Arhgef9-210ENSMUST00000182001 4622 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
PrkdcP97313 Frmpd1-201ENSMUST00000044773 4812 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
PrkdcP97313 AC123954.1-201ENSMUST00000222404 3272 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PrkdcP97313 Olfr587-ps1-201ENSMUST00000118378 948 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PrkdcP97313 Gm13531-201ENSMUST00000121893 543 ntBASIC4.4□□□□□ -1.71
PrkdcP97313 Gm16096-202ENSMUST00000149386 819 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
PrkdcP97313 Olfr519-202ENSMUST00000202706 945 ntAPPRIS P1 BASIC4.4□□□□□ -1.71
PrkdcP97313 Ppp1r36-204ENSMUST00000220187 504 ntTSL 3 BASIC4.4□□□□□ -1.71
PrkdcP97313 Gm25187-201ENSMUST00000083906 133 ntBASIC4.4□□□□□ -1.71
PrkdcP97313 Gm44178-201ENSMUST00000205229 2930 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 E330034G19Rik-204ENSMUST00000162224 1350 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Olfr1364-203ENSMUST00000213912 3119 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PrkdcP97313 Psg16-201ENSMUST00000071399 4421 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Gm10687-201ENSMUST00000180670 3233 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Mettl15-201ENSMUST00000081631 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Gm38412-201ENSMUST00000199205 3895 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Olfr121-202ENSMUST00000174675 1494 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PrkdcP97313 Ccdc40-201ENSMUST00000035935 4979 ntAPPRIS P2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC4.39□□□□□ -1.71
PrkdcP97313 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PrkdcP97313 Hsd3b2-202ENSMUST00000107022 3695 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Ttc41-201ENSMUST00000061458 1815 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
PrkdcP97313 Gm24125-201ENSMUST00000104105 137 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Gm25415-201ENSMUST00000104220 132 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Gm13207-201ENSMUST00000119862 773 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC4.39□□□□□ -1.71
PrkdcP97313 Hnf1aos2-201ENSMUST00000138108 442 ntTSL 3 BASIC4.39□□□□□ -1.71
PrkdcP97313 Gm8220-202ENSMUST00000169601 525 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
PrkdcP97313 Gm43554-201ENSMUST00000199987 186 ntBASIC4.39□□□□□ -1.71
PrkdcP97313 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
Retrieved 100 of 76,532 protein–RNA pairs in 73.3 ms