Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Vmn1r-ps21-201ENSMUST00000176891 925 ntBASIC7.41□□□□□ -1.22
NrlP54846 Prl3c1-203ENSMUST00000178072 579 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
NrlP54846 Gm4373-201ENSMUST00000178571 556 ntBASIC7.41□□□□□ -1.22
NrlP54846 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NrlP54846 1810041H14Rik-202ENSMUST00000187218 434 ntTSL 3 BASIC7.41□□□□□ -1.22
NrlP54846 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC7.41□□□□□ -1.22
NrlP54846 Gm8883-201ENSMUST00000187594 454 ntTSL 3 BASIC7.41□□□□□ -1.22
NrlP54846 Nanog-ps2-201ENSMUST00000190988 529 ntBASIC7.41□□□□□ -1.22
NrlP54846 Gm5711-201ENSMUST00000197896 421 ntBASIC7.41□□□□□ -1.22
NrlP54846 Gm18747-201ENSMUST00000198129 648 ntBASIC7.41□□□□□ -1.22
NrlP54846 Gm44837-201ENSMUST00000206863 717 ntBASIC7.41□□□□□ -1.22
NrlP54846 Gm44865-201ENSMUST00000207240 531 ntBASIC7.41□□□□□ -1.22
NrlP54846 Gm44943-201ENSMUST00000207254 300 ntBASIC7.41□□□□□ -1.22
NrlP54846 Gm31036-201ENSMUST00000212925 521 ntTSL 3 BASIC7.41□□□□□ -1.22
NrlP54846 Olfr1048-202ENSMUST00000215607 2981 ntAPPRIS ALT2 TSL 3 BASIC7.41□□□□□ -1.22
NrlP54846 AC153528.1-201ENSMUST00000217696 434 ntTSL 3 BASIC7.41□□□□□ -1.22
NrlP54846 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC7.41□□□□□ -1.22
NrlP54846 AC122533.1-201ENSMUST00000225177 767 ntBASIC7.41□□□□□ -1.22
NrlP54846 Gm2840-201ENSMUST00000048361 411 ntBASIC7.41□□□□□ -1.22
NrlP54846 Vmn1r74-201ENSMUST00000050416 915 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
NrlP54846 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NrlP54846 Eri2-202ENSMUST00000063902 1241 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NrlP54846 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
NrlP54846 Sorbs2-207ENSMUST00000130011 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
NrlP54846 Plcb1-201ENSMUST00000070724 3853 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NrlP54846 Btbd3-201ENSMUST00000075410 4940 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NrlP54846 Phxr4-202ENSMUST00000216590 1391 ntBASIC7.41□□□□□ -1.22
NrlP54846 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NrlP54846 Slc4a4-202ENSMUST00000113218 3269 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NrlP54846 Platr23-201ENSMUST00000180797 2439 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NrlP54846 Ank3-239ENSMUST00000183148 7404 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
NrlP54846 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NrlP54846 Chrnb3-201ENSMUST00000060943 4589 ntAPPRIS P4 TSL 1 (best) BASIC7.41□□□□□ -1.22
NrlP54846 Macrod2os2-201ENSMUST00000143227 3566 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
NrlP54846 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC7.41□□□□□ -1.22
NrlP54846 Gm7361-201ENSMUST00000074148 2995 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NrlP54846 Wdr35-202ENSMUST00000111113 4312 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
NrlP54846 Asap1-215ENSMUST00000177035 3228 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
NrlP54846 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NrlP54846 Gm28509-201ENSMUST00000189428 2170 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NrlP54846 AC161247.1-201ENSMUST00000217744 2295 ntBASIC7.4□□□□□ -1.22
NrlP54846 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NrlP54846 Top3b-203ENSMUST00000119787 2950 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NrlP54846 Klhl13-203ENSMUST00000115316 3064 ntTSL 5 BASIC7.4□□□□□ -1.22
NrlP54846 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
NrlP54846 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
NrlP54846 Vmn1r22-201ENSMUST00000227342 3057 ntBASIC7.4□□□□□ -1.22
NrlP54846 Vmn1r22-204ENSMUST00000228257 3079 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
NrlP54846 Zfp663-201ENSMUST00000073062 3157 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
NrlP54846 E430021H15Rik-201ENSMUST00000198875 3459 ntBASIC7.4□□□□□ -1.22
NrlP54846 Cpeb4-202ENSMUST00000109412 6303 ntAPPRIS ALT1 TSL 5 BASIC7.4□□□□□ -1.22
NrlP54846 Snord65-201ENSMUST00000104269 72 ntBASIC7.4□□□□□ -1.22
NrlP54846 Gm25724-201ENSMUST00000104531 117 ntBASIC7.4□□□□□ -1.22
NrlP54846 Gm14202-201ENSMUST00000120121 311 ntBASIC7.4□□□□□ -1.22
NrlP54846 Gm6451-201ENSMUST00000121488 717 ntBASIC7.4□□□□□ -1.22
NrlP54846 Gm16052-201ENSMUST00000129681 505 ntTSL 2 BASIC7.4□□□□□ -1.22
NrlP54846 Gm14272-201ENSMUST00000133525 484 ntTSL 3 BASIC7.4□□□□□ -1.22
NrlP54846 Gm13708-201ENSMUST00000145170 390 ntTSL 5 BASIC7.4□□□□□ -1.22
NrlP54846 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC7.4□□□□□ -1.22
NrlP54846 Gm11107-201ENSMUST00000165414 505 ntBASIC7.4□□□□□ -1.22
NrlP54846 Gm17063-201ENSMUST00000168135 456 ntBASIC7.4□□□□□ -1.22
NrlP54846 Gm22990-201ENSMUST00000175427 89 ntBASIC7.4□□□□□ -1.22
NrlP54846 Mir5617-201ENSMUST00000176786 57 ntBASIC7.4□□□□□ -1.22
NrlP54846 Gm37637-201ENSMUST00000195540 1256 ntBASIC7.4□□□□□ -1.22
NrlP54846 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC7.4□□□□□ -1.22
NrlP54846 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
NrlP54846 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
NrlP54846 Olfr206-202ENSMUST00000207927 1122 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
NrlP54846 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NrlP54846 Gm19201-201ENSMUST00000210127 778 ntBASIC7.4□□□□□ -1.22
NrlP54846 AC123830.1-201ENSMUST00000217156 609 ntTSL 3 BASIC7.4□□□□□ -1.22
NrlP54846 AC123043.1-201ENSMUST00000221068 645 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
NrlP54846 AC123658.1-201ENSMUST00000228364 867 ntBASIC7.4□□□□□ -1.22
NrlP54846 Vmn1r68-201ENSMUST00000058362 960 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
NrlP54846 Krtap13-1-201ENSMUST00000060494 748 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
NrlP54846 Orm2-201ENSMUST00000075341 775 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NrlP54846 Olfr703-201ENSMUST00000098142 960 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
NrlP54846 Bglap2-201ENSMUST00000098956 471 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NrlP54846 Zfp113-204ENSMUST00000165640 1320 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
NrlP54846 Gm44231-201ENSMUST00000204106 4075 ntBASIC7.4□□□□□ -1.22
NrlP54846 AC162301.1-201ENSMUST00000228785 1542 ntBASIC7.4□□□□□ -1.22
NrlP54846 Vps13a-201ENSMUST00000068156 10838 ntAPPRIS P1 TSL 2 BASIC7.4□□□□□ -1.22
NrlP54846 Gm43845-201ENSMUST00000202462 1820 ntBASIC7.4□□□□□ -1.23
NrlP54846 Golph3l-202ENSMUST00000098861 2221 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
NrlP54846 Gm38173-201ENSMUST00000193126 2314 ntBASIC7.4□□□□□ -1.23
NrlP54846 D5Ertd577e-202ENSMUST00000202481 2469 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NrlP54846 Uba1y-ps2-201ENSMUST00000190871 2544 ntBASIC7.4□□□□□ -1.23
NrlP54846 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NrlP54846 Gm37470-201ENSMUST00000193378 2798 ntBASIC7.4□□□□□ -1.23
NrlP54846 Cd36-204ENSMUST00000170051 3399 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.23
NrlP54846 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
NrlP54846 Sec24c-202ENSMUST00000223751 4196 ntBASIC7.39□□□□□ -1.23
NrlP54846 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
NrlP54846 Olfr76-203ENSMUST00000214676 3175 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
NrlP54846 Bicd1-201ENSMUST00000003544 2928 ntAPPRIS ALT1 TSL 5 BASIC7.39□□□□□ -1.23
NrlP54846 AC164623.1-201ENSMUST00000217947 2709 ntTSL 5 BASIC7.39□□□□□ -1.23
NrlP54846 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC7.39□□□□□ -1.23
NrlP54846 Nrcam-201ENSMUST00000020939 4469 ntAPPRIS P4 TSL 1 (best) BASIC7.39□□□□□ -1.23
NrlP54846 Igkv6-20-201ENSMUST00000103388 375 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
NrlP54846 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms