Protein–RNA interactions for Protein: P48381

Rfx3, Transcription factor RFX3, mousemouse

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx3P48381 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rfx3P48381 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rfx3P48381 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rfx3P48381 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rfx3P48381 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rfx3P48381 AC122263.1-201ENSMUST00000228636 2805 ntBASIC6.03□□□□□ -1.44
Rfx3P48381 Kcnj16-202ENSMUST00000106636 3623 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Rfx3P48381 Ncr1-201ENSMUST00000006792 1463 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.44
Rfx3P48381 Eif4a2-203ENSMUST00000115341 1875 ntAPPRIS ALT1 TSL 5 BASIC6.02□□□□□ -1.44
Rfx3P48381 Alkbh8-202ENSMUST00000165105 2256 ntAPPRIS P2 TSL 5 BASIC6.02□□□□□ -1.44
Rfx3P48381 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC6.02□□□□□ -1.45
Rfx3P48381 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 B020004C17Rik-201ENSMUST00000178161 2385 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 D930016D06Rik-202ENSMUST00000181620 3805 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Tet2-204ENSMUST00000196398 9021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Psd3-202ENSMUST00000059374 2876 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.02□□□□□ -1.45
Rfx3P48381 4921534A09Rik-201ENSMUST00000213976 2495 ntBASIC6.02□□□□□ -1.45
Rfx3P48381 Vmn1r35-203ENSMUST00000227354 2319 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Rfx3P48381 Pcdh15-237ENSMUST00000193361 7881 ntAPPRIS P3 TSL 5 BASIC6.02□□□□□ -1.45
Rfx3P48381 Gm44194-201ENSMUST00000204222 3229 ntBASIC6.02□□□□□ -1.45
Rfx3P48381 Sorbs2-209ENSMUST00000132139 4644 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Rfx3P48381 Gm45457-201ENSMUST00000209931 3089 ntBASIC6.02□□□□□ -1.45
Rfx3P48381 Olfr1293-ps-201ENSMUST00000102551 888 ntAPPRIS ALT2 BASIC6.02□□□□□ -1.45
Rfx3P48381 Gm25379-201ENSMUST00000104338 114 ntBASIC6.02□□□□□ -1.45
Rfx3P48381 Gm13739-201ENSMUST00000118020 530 ntBASIC6.02□□□□□ -1.45
Rfx3P48381 Gm14631-201ENSMUST00000119067 594 ntBASIC6.02□□□□□ -1.45
Rfx3P48381 Gm12104-201ENSMUST00000120359 979 ntBASIC6.02□□□□□ -1.45
Rfx3P48381 Gm16984-201ENSMUST00000130003 982 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Gm16357-201ENSMUST00000144091 474 ntBASIC6.02□□□□□ -1.45
Rfx3P48381 Gm25722-201ENSMUST00000157498 279 ntBASIC6.02□□□□□ -1.45
Rfx3P48381 Lrmda-203ENSMUST00000159777 761 ntAPPRIS ALT2 TSL 3 BASIC6.02□□□□□ -1.45
Rfx3P48381 Gm16006-201ENSMUST00000160938 566 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Gm3159-201ENSMUST00000164038 997 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Rfx3P48381 Gm3127-201ENSMUST00000167839 997 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Rfx3P48381 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Gm27596-201ENSMUST00000185061 83 ntBASIC6.02□□□□□ -1.45
Rfx3P48381 Gm28195-201ENSMUST00000186992 372 ntBASIC6.02□□□□□ -1.45
Rfx3P48381 Gm29099-201ENSMUST00000187370 760 ntTSL 5 BASIC6.02□□□□□ -1.45
Rfx3P48381 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC6.02□□□□□ -1.45
Rfx3P48381 Gm29470-201ENSMUST00000188007 696 ntBASIC6.02□□□□□ -1.45
Rfx3P48381 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC6.02□□□□□ -1.45
Rfx3P48381 Rd3l-204ENSMUST00000190536 1242 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Csf2-201ENSMUST00000019060 800 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Ighv8-15-201ENSMUST00000197770 294 ntBASIC6.02□□□□□ -1.45
Rfx3P48381 1700034P13Rik-206ENSMUST00000207445 1146 ntTSL 5 BASIC6.02□□□□□ -1.45
Rfx3P48381 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Gm34047-201ENSMUST00000223547 606 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Olfr410-201ENSMUST00000052254 948 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Rfx3P48381 Olfr1378-201ENSMUST00000052285 948 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Rfx3P48381 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Rfx3P48381 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Gm42611-201ENSMUST00000199446 3407 ntBASIC6.02□□□□□ -1.45
Rfx3P48381 Spin4-201ENSMUST00000096367 4173 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
Rfx3P48381 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Bbx-201ENSMUST00000066037 4523 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Gm43211-201ENSMUST00000196901 1899 ntBASIC6.02□□□□□ -1.45
Rfx3P48381 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC6.02□□□□□ -1.45
Rfx3P48381 AC153501.1-201ENSMUST00000218156 1860 ntTSL 5 BASIC6.02□□□□□ -1.45
Rfx3P48381 AC124183.1-201ENSMUST00000222367 2135 ntBASIC6.02□□□□□ -1.45
Rfx3P48381 Ctage5-202ENSMUST00000069430 2869 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Awat1-201ENSMUST00000096361 1390 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 9930038B18Rik-201ENSMUST00000151816 3966 ntTSL 5 BASIC6.02□□□□□ -1.45
Rfx3P48381 Olfr720-204ENSMUST00000217642 4832 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
Rfx3P48381 Psd3-206ENSMUST00000120071 9203 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Zc4h2-202ENSMUST00000119640 2075 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Klkb1-201ENSMUST00000026907 5249 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Rfx3P48381 Gm43335-201ENSMUST00000198299 3276 ntBASIC6.01□□□□□ -1.45
Rfx3P48381 Abcd2-201ENSMUST00000069511 5527 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Rfx3P48381 Gm10309-201ENSMUST00000095186 2005 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Rfx3P48381 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Rfx3P48381 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.01□□□□□ -1.45
Rfx3P48381 Vmn2r13-201ENSMUST00000053253 2496 ntAPPRIS P1 TSL 5 BASIC6.01□□□□□ -1.45
Rfx3P48381 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.01□□□□□ -1.45
Rfx3P48381 AC141476.1-201ENSMUST00000224988 3387 ntBASIC6.01□□□□□ -1.45
Rfx3P48381 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
Rfx3P48381 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
Rfx3P48381 Gm25724-201ENSMUST00000104531 117 ntBASIC6.01□□□□□ -1.45
Rfx3P48381 Atp5l-ps2-201ENSMUST00000121382 314 ntBASIC6.01□□□□□ -1.45
Rfx3P48381 Gm7599-201ENSMUST00000121453 796 ntBASIC6.01□□□□□ -1.45
Rfx3P48381 Gm16157-202ENSMUST00000135564 1082 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Rfx3P48381 Gm13715-201ENSMUST00000136578 411 ntTSL 3 BASIC6.01□□□□□ -1.45
Rfx3P48381 Gm15628-201ENSMUST00000162051 547 ntTSL 2 BASIC6.01□□□□□ -1.45
Rfx3P48381 Rian-215ENSMUST00000183180 633 ntTSL 5 BASIC6.01□□□□□ -1.45
Rfx3P48381 Mir6241-201ENSMUST00000184225 103 ntBASIC6.01□□□□□ -1.45
Rfx3P48381 Mir6987-201ENSMUST00000184789 73 ntBASIC6.01□□□□□ -1.45
Rfx3P48381 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.01□□□□□ -1.45
Rfx3P48381 Gm5244-202ENSMUST00000189517 743 ntBASIC6.01□□□□□ -1.45
Rfx3P48381 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
Rfx3P48381 4930590H14Rik-201ENSMUST00000193999 551 ntBASIC6.01□□□□□ -1.45
Rfx3P48381 Gm31925-202ENSMUST00000194266 537 ntTSL 5 BASIC6.01□□□□□ -1.45
Rfx3P48381 Sox2ot-214ENSMUST00000198758 1286 ntTSL 2 BASIC6.01□□□□□ -1.45
Rfx3P48381 Gm21048-201ENSMUST00000202470 1166 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 76.1 ms