Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Traf1P39428 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Traf1P39428 Gm11346-204ENSMUST00000149751 2893 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Traf1P39428 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Traf1P39428 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Traf1P39428 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Traf1P39428 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC7.9□□□□□ -1.14
Traf1P39428 AC134577.3-201ENSMUST00000226490 3000 ntBASIC7.9□□□□□ -1.14
Traf1P39428 Mapre2-202ENSMUST00000115830 2496 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Traf1P39428 Chrnb3-202ENSMUST00000079463 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC7.9□□□□□ -1.14
Traf1P39428 P2ry12-204ENSMUST00000199609 2157 ntAPPRIS P1 TSL 3 BASIC7.9□□□□□ -1.14
Traf1P39428 Mrps25-203ENSMUST00000140438 6073 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Traf1P39428 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC7.9□□□□□ -1.14
Traf1P39428 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Traf1P39428 Gm15149-201ENSMUST00000119370 360 ntBASIC7.9□□□□□ -1.14
Traf1P39428 Gm12583-201ENSMUST00000120677 853 ntBASIC7.9□□□□□ -1.14
Traf1P39428 Gm13237-201ENSMUST00000122151 635 ntBASIC7.9□□□□□ -1.14
Traf1P39428 Gm2800-201ENSMUST00000122988 641 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Traf1P39428 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Traf1P39428 Gm23756-201ENSMUST00000157582 114 ntBASIC7.9□□□□□ -1.14
Traf1P39428 Gm25435-201ENSMUST00000158277 267 ntBASIC7.9□□□□□ -1.14
Traf1P39428 Gm24176-201ENSMUST00000158928 121 ntBASIC7.9□□□□□ -1.14
Traf1P39428 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.9□□□□□ -1.14
Traf1P39428 Gm25025-201ENSMUST00000175018 111 ntBASIC7.9□□□□□ -1.14
Traf1P39428 Gm26570-201ENSMUST00000180672 342 ntBASIC7.9□□□□□ -1.14
Traf1P39428 Gm26901-201ENSMUST00000181554 1193 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Traf1P39428 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Traf1P39428 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Traf1P39428 Gm21301-201ENSMUST00000189476 699 ntBASIC7.9□□□□□ -1.14
Traf1P39428 Gm29050-202ENSMUST00000190865 502 ntTSL 2 BASIC7.9□□□□□ -1.14
Traf1P39428 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC7.9□□□□□ -1.14
Traf1P39428 Gm1969-201ENSMUST00000198125 1220 ntBASIC7.9□□□□□ -1.14
Traf1P39428 Gm32585-201ENSMUST00000198586 764 ntTSL 3 BASIC7.9□□□□□ -1.14
Traf1P39428 Gm5086-201ENSMUST00000210022 1297 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Traf1P39428 Gm39317-201ENSMUST00000213360 1138 ntTSL 5 BASIC7.9□□□□□ -1.14
Traf1P39428 Gm17950-201ENSMUST00000214617 646 ntBASIC7.9□□□□□ -1.14
Traf1P39428 AC131912.1-201ENSMUST00000217527 290 ntTSL 5 BASIC7.9□□□□□ -1.14
Traf1P39428 Gm46203-201ENSMUST00000218130 478 ntBASIC7.9□□□□□ -1.14
Traf1P39428 Gm7252-201ENSMUST00000223284 456 ntBASIC7.9□□□□□ -1.14
Traf1P39428 Olfr1440-201ENSMUST00000054567 948 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Traf1P39428 Olfr342-201ENSMUST00000074192 1054 ntAPPRIS P1 BASIC7.9□□□□□ -1.14
Traf1P39428 E330035G20Rik-202ENSMUST00000223323 3578 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Traf1P39428 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC7.9□□□□□ -1.14
Traf1P39428 Gm8700-201ENSMUST00000222187 3054 ntBASIC7.9□□□□□ -1.14
Traf1P39428 Gm27179-201ENSMUST00000184652 3017 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.14
Traf1P39428 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Traf1P39428 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Traf1P39428 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC7.9□□□□□ -1.15
Traf1P39428 Etl4-209ENSMUST00000114627 7413 ntAPPRIS P3 TSL 5 BASIC7.9□□□□□ -1.15
Traf1P39428 Vwa3a-205ENSMUST00000167213 4148 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Traf1P39428 Sestd1-202ENSMUST00000102660 8990 ntAPPRIS P1 TSL 5 BASIC7.9□□□□□ -1.15
Traf1P39428 Pigc-202ENSMUST00000111594 3290 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.15
Traf1P39428 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Traf1P39428 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.89□□□□□ -1.15
Traf1P39428 AC117232.2-201ENSMUST00000219469 2917 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Traf1P39428 Gm37595-201ENSMUST00000192668 1742 ntBASIC7.89□□□□□ -1.15
Traf1P39428 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Traf1P39428 AC155234.1-201ENSMUST00000225610 2823 ntBASIC7.89□□□□□ -1.15
Traf1P39428 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Traf1P39428 Gm34921-201ENSMUST00000219528 1406 ntTSL 5 BASIC7.89□□□□□ -1.15
Traf1P39428 Daw1-203ENSMUST00000113436 1351 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Traf1P39428 Gm44676-201ENSMUST00000208520 3055 ntBASIC7.89□□□□□ -1.15
Traf1P39428 Gm43330-201ENSMUST00000199706 2153 ntBASIC7.89□□□□□ -1.15
Traf1P39428 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Traf1P39428 Gm14116-201ENSMUST00000117733 805 ntBASIC7.89□□□□□ -1.15
Traf1P39428 Rpl22-ps1-201ENSMUST00000118652 386 ntBASIC7.89□□□□□ -1.15
Traf1P39428 Gm15835-201ENSMUST00000127697 356 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Traf1P39428 Gm27186-201ENSMUST00000184223 307 ntBASIC7.89□□□□□ -1.15
Traf1P39428 Gm28846-201ENSMUST00000189161 368 ntBASIC7.89□□□□□ -1.15
Traf1P39428 Gm35323-201ENSMUST00000191836 499 ntBASIC7.89□□□□□ -1.15
Traf1P39428 AC117240.1-201ENSMUST00000199436 61 ntBASIC7.89□□□□□ -1.15
Traf1P39428 Gm43459-201ENSMUST00000202093 331 ntBASIC7.89□□□□□ -1.15
Traf1P39428 Gm38840-201ENSMUST00000204716 843 ntBASIC7.89□□□□□ -1.15
Traf1P39428 Gm9367-201ENSMUST00000205703 546 ntBASIC7.89□□□□□ -1.15
Traf1P39428 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC7.89□□□□□ -1.15
Traf1P39428 AC148328.2-201ENSMUST00000216960 262 ntBASIC7.89□□□□□ -1.15
Traf1P39428 Gm33308-202ENSMUST00000218566 652 ntTSL 3 BASIC7.89□□□□□ -1.15
Traf1P39428 Gm36607-201ENSMUST00000222750 1087 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Traf1P39428 Gm9267-201ENSMUST00000222831 404 ntBASIC7.89□□□□□ -1.15
Traf1P39428 AC091237.1-201ENSMUST00000224911 637 ntBASIC7.89□□□□□ -1.15
Traf1P39428 Cetn1-201ENSMUST00000062769 1247 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Traf1P39428 Olfr177-201ENSMUST00000072853 930 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Traf1P39428 Olfr1457-201ENSMUST00000075170 954 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Traf1P39428 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Traf1P39428 Gm15448-202ENSMUST00000108619 2097 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Traf1P39428 Elmo1-202ENSMUST00000180626 2020 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Traf1P39428 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Traf1P39428 Svil-201ENSMUST00000025079 7433 ntAPPRIS P3 TSL 1 (best) BASIC7.89□□□□□ -1.15
Traf1P39428 Gm37347-201ENSMUST00000193969 3071 ntBASIC7.89□□□□□ -1.15
Traf1P39428 Etl4-202ENSMUST00000066509 7197 ntAPPRIS ALT2 TSL 5 BASIC7.89□□□□□ -1.15
Traf1P39428 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC7.89□□□□□ -1.15
Traf1P39428 Elmod2-201ENSMUST00000053902 4319 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.15
Traf1P39428 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC7.89□□□□□ -1.15
Traf1P39428 Pcbp2-201ENSMUST00000077037 2868 ntAPPRIS P4 TSL 1 (best) BASIC7.89□□□□□ -1.15
Traf1P39428 Ccdc38-203ENSMUST00000132214 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 Sfmbt2-201ENSMUST00000041105 7874 ntAPPRIS ALT2 TSL 5 BASIC7.88□□□□□ -1.15
Traf1P39428 AC117608.1-201ENSMUST00000225500 3418 ntBASIC7.88□□□□□ -1.15
Traf1P39428 Gm31520-202ENSMUST00000203574 1524 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 Lrrc6-201ENSMUST00000023006 2084 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
Traf1P39428 Cltc-201ENSMUST00000060766 6163 ntTSL 5 BASIC7.88□□□□□ -1.15
Retrieved 100 of 76,532 protein–RNA pairs in 54.8 ms