Protein–RNA interactions for Protein: A4IF42

Gm4559, ENSMUSG00000056885 protein (Fragment), mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm4559A4IF42 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Gp1ba-201ENSMUST00000055184 2710 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Eif4a2-202ENSMUST00000077605 2708 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Gm7278-201ENSMUST00000119836 1401 ntBASIC1.64□□□□□ -2.15
Gm4559A4IF42 Mrps26-202ENSMUST00000145614 4278 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Glod4-209ENSMUST00000170710 1445 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Prr5l-210ENSMUST00000171088 4296 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Pdyn-201ENSMUST00000028883 2386 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Bivm-201ENSMUST00000035991 3313 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Olfr1218-203ENSMUST00000215048 3900 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 BC048559-202ENSMUST00000215667 3561 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Gm35808-201ENSMUST00000204769 2602 ntBASIC1.64□□□□□ -2.15
Gm4559A4IF42 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Rnf225-201ENSMUST00000045870 3239 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Ephx1-202ENSMUST00000111068 1699 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Rph3al-201ENSMUST00000021208 1690 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Gm7389-201ENSMUST00000181162 2884 ntBASIC1.64□□□□□ -2.15
Gm4559A4IF42 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Gfm1-201ENSMUST00000077271 4078 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Gm15635-204ENSMUST00000208024 2539 ntBASIC1.64□□□□□ -2.15
Gm4559A4IF42 Art4-201ENSMUST00000032341 2517 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Cct3-208ENSMUST00000168062 1943 ntTSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Alox5-207ENSMUST00000170186 1929 ntTSL 5 BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Gm42572-201ENSMUST00000202292 3378 ntBASIC1.64□□□□□ -2.15
Gm4559A4IF42 Lnx1-202ENSMUST00000087161 2753 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Klhl5-201ENSMUST00000101191 3610 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Eya1-209ENSMUST00000190337 2199 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Alkbh8-201ENSMUST00000053407 3603 ntAPPRIS P2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Nlgn1-203ENSMUST00000191835 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Cyp4f39-201ENSMUST00000003413 1599 ntAPPRIS P1 TSL 5 BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Cwc22-202ENSMUST00000111818 3255 ntAPPRIS ALT2 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Kcnk2-201ENSMUST00000079451 3297 ntAPPRIS ALT1 TSL 1 (best) BASIC1.64□□□□□ -2.15
Gm4559A4IF42 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Upk3b-201ENSMUST00000062606 3530 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Atxn7l1-208ENSMUST00000136644 3155 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Mirg-208ENSMUST00000182499 3187 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Ppp1r12a-201ENSMUST00000070663 3403 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Trim50-202ENSMUST00000111180 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Pex5-203ENSMUST00000112530 3051 ntTSL 5 BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Pex5-204ENSMUST00000112531 3075 ntAPPRIS ALT1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 5430434F05Rik-201ENSMUST00000206080 3553 ntBASIC1.63□□□□□ -2.15
Gm4559A4IF42 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Mxi1-203ENSMUST00000111737 4843 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Ankrd34c-202ENSMUST00000185470 2475 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Ap2b1-206ENSMUST00000176523 2742 ntTSL 5 BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 AC174678.1-201ENSMUST00000228007 2749 ntBASIC1.63□□□□□ -2.15
Gm4559A4IF42 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Trappc8-202ENSMUST00000097658 2703 ntAPPRIS P3 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Ttll8-201ENSMUST00000109371 2968 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Lipa-201ENSMUST00000049572 2969 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Gm20628-201ENSMUST00000177363 3215 ntBASIC1.63□□□□□ -2.15
Gm4559A4IF42 Sema3d-205ENSMUST00000197927 3207 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Gm4559A4IF42 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 118.3 ms