Protein–RNA interactions for Protein: Q8CCB4

Vps53, Vacuolar protein sorting-associated protein 53 homolog, mousemouse

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps53Q8CCB4 Gm37627-201ENSMUST00000194585 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Ighv8-3-201ENSMUST00000194985 295 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm34274-201ENSMUST00000195825 615 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm4860-201ENSMUST00000200368 454 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 AC099934.1-201ENSMUST00000200493 79 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 4930417O13Rik-204ENSMUST00000205000 999 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Haus2-202ENSMUST00000110706 3055 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Dcdc5-201ENSMUST00000037284 3093 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Rbfox1-201ENSMUST00000056416 4084 ntAPPRIS P1 TSL 1 (best) BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 1810064F22Rik-203ENSMUST00000188595 2307 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm10307-201ENSMUST00000189839 1337 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm36930-201ENSMUST00000195431 2376 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Gm28667-201ENSMUST00000189873 2171 ntBASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC7.97□□□□□ -1.13
Vps53Q8CCB4 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC7.96□□□□□ -1.13
Vps53Q8CCB4 Gm43019-201ENSMUST00000196948 2863 ntBASIC7.96□□□□□ -1.13
Vps53Q8CCB4 Fam196b-201ENSMUST00000093192 5031 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Vps53Q8CCB4 Tnfsf4-201ENSMUST00000028024 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Vps53Q8CCB4 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Vps53Q8CCB4 Slu7-206ENSMUST00000178622 3566 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
Vps53Q8CCB4 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.13
Vps53Q8CCB4 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Vps53Q8CCB4 Gm29017-201ENSMUST00000190598 2092 ntTSL 1 (best) BASIC7.96□□□□□ -1.13
Vps53Q8CCB4 Snrpb2-201ENSMUST00000008477 2061 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Vps53Q8CCB4 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Vps53Q8CCB4 Hivep3-202ENSMUST00000106307 11838 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Vps53Q8CCB4 A4gnt-201ENSMUST00000042553 2757 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Vps53Q8CCB4 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.13
Vps53Q8CCB4 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC7.96□□□□□ -1.13
Vps53Q8CCB4 Gm5454-201ENSMUST00000052030 1453 ntBASIC7.96□□□□□ -1.13
Vps53Q8CCB4 Zdhhc11-201ENSMUST00000091493 1460 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Vps53Q8CCB4 Zfp712-201ENSMUST00000167565 3968 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.13
Vps53Q8CCB4 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 AC131667.1-201ENSMUST00000214665 2175 ntBASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Tcf7l2-201ENSMUST00000041717 3590 ntAPPRIS ALT2 TSL 1 (best) BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm12886-201ENSMUST00000106266 1149 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm13137-201ENSMUST00000118035 345 ntBASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm5601-201ENSMUST00000118909 972 ntBASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm6654-201ENSMUST00000118950 348 ntBASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm25843-201ENSMUST00000122582 314 ntBASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC7.96□□□□□ -1.14
Vps53Q8CCB4 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm13485-201ENSMUST00000146690 659 ntTSL 2 BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Six3os1-204ENSMUST00000161688 567 ntTSL 3 BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm27207-201ENSMUST00000184995 878 ntTSL 3 BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm29357-201ENSMUST00000186877 698 ntBASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Ly6e-206ENSMUST00000187284 654 ntAPPRIS P1 TSL 5 BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm43316-201ENSMUST00000197252 1295 ntBASIC7.96□□□□□ -1.14
Vps53Q8CCB4 S100a6-203ENSMUST00000198128 464 ntAPPRIS P1 TSL 3 BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Olfr1460-ps1-201ENSMUST00000208975 899 ntBASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm45431-201ENSMUST00000210143 588 ntTSL 5 BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm5119-201ENSMUST00000215858 634 ntBASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm19154-201ENSMUST00000223330 940 ntBASIC7.96□□□□□ -1.14
Vps53Q8CCB4 AC163660.1-201ENSMUST00000223696 818 ntBASIC7.96□□□□□ -1.14
Vps53Q8CCB4 AC159267.1-201ENSMUST00000226702 678 ntBASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Raet1e-201ENSMUST00000065527 1274 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm5528-201ENSMUST00000076314 480 ntBASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm26130-201ENSMUST00000083171 138 ntBASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Olfr473-201ENSMUST00000084761 933 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Mrgprb5-201ENSMUST00000094389 1037 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Kif15-201ENSMUST00000040717 4858 ntAPPRIS P1 TSL 1 (best) BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Ank3-215ENSMUST00000182269 4411 ntTSL 5 BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm29502-201ENSMUST00000185979 3739 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm6327-201ENSMUST00000171185 1335 ntBASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Gm9871-203ENSMUST00000204837 1560 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Pramel-201ENSMUST00000118979 1383 ntBASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Tln2-202ENSMUST00000040025 12132 ntAPPRIS P2 TSL 5 BASIC7.96□□□□□ -1.14
Vps53Q8CCB4 Olfr1015-203ENSMUST00000215945 2479 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Alpk2-201ENSMUST00000035548 7249 ntAPPRIS P1 TSL 5 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Dock7-205ENSMUST00000127417 6796 ntAPPRIS ALT2 TSL 5 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Ap4e1-201ENSMUST00000002063 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm11245-201ENSMUST00000119419 1037 ntBASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm12400-201ENSMUST00000120915 1003 ntBASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm15096-201ENSMUST00000121918 878 ntBASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm11609-201ENSMUST00000121926 793 ntBASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm14847-201ENSMUST00000121978 519 ntBASIC7.95□□□□□ -1.14
Vps53Q8CCB4 2610204G07Rik-201ENSMUST00000131215 992 ntTSL 1 (best) BASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm7613-201ENSMUST00000139070 487 ntBASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm3326-201ENSMUST00000164656 1043 ntBASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.95□□□□□ -1.14
Vps53Q8CCB4 Gm23164-201ENSMUST00000175084 111 ntBASIC7.95□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 76.2 ms