Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Gm40649-201ENSMUST00000219795 1457 ntTSL 5 BASIC5.9□□□□□ -1.47
Nkx3-1P97436 Gm43497-201ENSMUST00000201137 2316 ntBASIC5.9□□□□□ -1.47
Nkx3-1P97436 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 Slc6a20a-203ENSMUST00000171647 3894 ntTSL 5 BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Rpp40-201ENSMUST00000171686 4380 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Cx3cr1-203ENSMUST00000215016 4493 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm17203-201ENSMUST00000164379 4017 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Mrpl1-202ENSMUST00000117766 3556 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Cd69-201ENSMUST00000032259 1687 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Unc13c-202ENSMUST00000184666 8796 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Ighv2-7-201ENSMUST00000103456 355 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm22374-201ENSMUST00000104583 132 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm12101-201ENSMUST00000121590 390 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm23430-201ENSMUST00000122490 314 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 4930480G23Rik-201ENSMUST00000125909 1013 ntTSL 5 BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Ttc39aos1-201ENSMUST00000150239 796 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm23903-201ENSMUST00000157566 131 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm10177-201ENSMUST00000160052 444 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm16133-202ENSMUST00000160278 565 ntTSL 3 BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Cfhr3-201ENSMUST00000170441 1022 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm4152-201ENSMUST00000172675 259 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm23968-201ENSMUST00000175047 125 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 1700104B16Rik-202ENSMUST00000187948 722 ntTSL 2 BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm37328-201ENSMUST00000193191 640 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm37177-201ENSMUST00000193768 417 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm29784-201ENSMUST00000196217 406 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm43748-201ENSMUST00000202329 1233 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm42673-201ENSMUST00000202676 337 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm45589-201ENSMUST00000209366 895 ntTSL 3 BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm46203-201ENSMUST00000218130 478 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm5928-201ENSMUST00000221839 466 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 1700040E09Rik-201ENSMUST00000222440 606 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Mir138-1-201ENSMUST00000083480 99 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 Vmn1r83-201ENSMUST00000086229 996 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Tbcel-202ENSMUST00000066179 3893 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Tm4sf1-205ENSMUST00000196979 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Eaf2-202ENSMUST00000075946 1878 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm19210-201ENSMUST00000199562 1350 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 Coro2a-201ENSMUST00000030021 4112 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Cyp4a14-201ENSMUST00000030487 2496 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Usp17ld-201ENSMUST00000073394 1987 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Dennd2c-204ENSMUST00000173206 4879 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Dpcr1-201ENSMUST00000095467 2611 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm44194-201ENSMUST00000204222 3229 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 Tarm1-202ENSMUST00000203020 1487 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Ikzf5-201ENSMUST00000046306 4430 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Ccdc170-202ENSMUST00000138112 3350 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Gm37755-201ENSMUST00000195880 2179 ntBASIC5.89□□□□□ -1.47
Nkx3-1P97436 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Nkx3-1P97436 Rad21l-202ENSMUST00000180195 1659 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Scn8a-205ENSMUST00000108910 11232 ntAPPRIS ALT1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx3-1P97436 CT030159.2-201ENSMUST00000221233 1742 ntTSL 5 BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx3-1P97436 2610021A01Rik-201ENSMUST00000163475 4004 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Gm21036-201ENSMUST00000207544 2611 ntBASIC5.88□□□□□ -1.47
Nkx3-1P97436 C1s2-202ENSMUST00000218020 2662 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx3-1P97436 C1s2-201ENSMUST00000068797 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Gm43398-201ENSMUST00000196584 2742 ntBASIC5.88□□□□□ -1.47
Nkx3-1P97436 Gm37653-201ENSMUST00000195401 3578 ntBASIC5.88□□□□□ -1.47
Nkx3-1P97436 Gm42763-201ENSMUST00000199595 2087 ntBASIC5.88□□□□□ -1.47
Nkx3-1P97436 Gm23748-201ENSMUST00000104227 131 ntBASIC5.88□□□□□ -1.47
Nkx3-1P97436 Gm24790-201ENSMUST00000104285 132 ntBASIC5.88□□□□□ -1.47
Nkx3-1P97436 Kat6b-203ENSMUST00000112458 997 ntTSL 5 BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Gm4985-201ENSMUST00000118300 1233 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Gm20491-201ENSMUST00000173765 1241 ntBASIC5.88□□□□□ -1.47
Nkx3-1P97436 Gm23945-201ENSMUST00000179609 92 ntBASIC5.88□□□□□ -1.47
Nkx3-1P97436 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Wfdc15b-201ENSMUST00000018355 510 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Gm28586-201ENSMUST00000189857 456 ntBASIC5.88□□□□□ -1.47
Nkx3-1P97436 Gm43576-201ENSMUST00000197937 871 ntBASIC5.88□□□□□ -1.47
Nkx3-1P97436 Gm43867-201ENSMUST00000203860 525 ntBASIC5.88□□□□□ -1.47
Nkx3-1P97436 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Gm2788-207ENSMUST00000211055 1078 ntTSL 5 BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC5.88□□□□□ -1.47
Nkx3-1P97436 A730091E23Rik-201ENSMUST00000221700 3825 ntBASIC5.88□□□□□ -1.47
Nkx3-1P97436 CT009713.1-201ENSMUST00000224828 853 ntBASIC5.88□□□□□ -1.47
Nkx3-1P97436 AC132260.1-201ENSMUST00000225499 734 ntBASIC5.88□□□□□ -1.47
Nkx3-1P97436 AC123656.1-201ENSMUST00000227121 581 ntBASIC5.88□□□□□ -1.47
Nkx3-1P97436 1700011L22Rik-201ENSMUST00000034109 964 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Zfp941-202ENSMUST00000106052 3851 ntAPPRIS P2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Hsd3b3-202ENSMUST00000094050 1327 ntTSL 5 BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Vmn1r188-203ENSMUST00000228243 8473 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC5.88□□□□□ -1.47
Nkx3-1P97436 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Btnl10-202ENSMUST00000069941 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC5.88□□□□□ -1.47
Nkx3-1P97436 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms