Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Fkbp1a-ps2-201ENSMUST00000219474 311 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 AC134917.2-201ENSMUST00000223354 124 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 AC122290.1-201ENSMUST00000225631 1078 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 n-R5s58-201ENSMUST00000093682 119 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Stat1-201ENSMUST00000070968 5151 ntAPPRIS P2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nphp4P59240 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nphp4P59240 Gpatch11-201ENSMUST00000170759 4198 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nphp4P59240 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Nphp4P59240 Bdnf-201ENSMUST00000053317 4266 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Nphp4P59240 Ctnnd1-208ENSMUST00000111677 5789 ntTSL 5 BASIC9.04□□□□□ -0.96
Nphp4P59240 Zrsr1-201ENSMUST00000049506 3282 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Nphp4P59240 Synpr-202ENSMUST00000112656 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nphp4P59240 Prkg1-201ENSMUST00000065067 3914 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nphp4P59240 Pgbd1-202ENSMUST00000122872 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nphp4P59240 Gm6101-201ENSMUST00000195384 1867 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Nphp4P59240 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nphp4P59240 CT025566.1-202ENSMUST00000224800 2511 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 Phlpp2-201ENSMUST00000034175 7839 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nphp4P59240 Fndc3b-204ENSMUST00000195008 6886 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nphp4P59240 Gm36930-201ENSMUST00000195431 2376 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC9.04□□□□□ -0.96
Nphp4P59240 Olfr97-201ENSMUST00000073667 1555 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Nphp4P59240 Gm38366-201ENSMUST00000193127 1934 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 4930547M16Rik-201ENSMUST00000181590 2400 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Nphp4P59240 Mir680-1-201ENSMUST00000102257 109 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 Gm12518-201ENSMUST00000122075 779 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 Gm23430-201ENSMUST00000122490 314 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 Gm24383-201ENSMUST00000122691 333 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 Gm11368-201ENSMUST00000139576 609 ntTSL 3 BASIC9.04□□□□□ -0.96
Nphp4P59240 Gm24435-201ENSMUST00000157886 110 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 Serpina3d-ps-201ENSMUST00000163110 1272 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 Gm7008-203ENSMUST00000171356 476 ntTSL 2 BASIC9.04□□□□□ -0.96
Nphp4P59240 Gm18799-201ENSMUST00000189104 913 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 A730094K22Rik-201ENSMUST00000193867 740 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 Gm36793-201ENSMUST00000199211 922 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
Nphp4P59240 Gm7492-201ENSMUST00000201745 725 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 Gm43850-201ENSMUST00000202021 578 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 Gm4083-201ENSMUST00000207158 451 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 Gm19212-201ENSMUST00000216642 862 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 AC170913.1-201ENSMUST00000221418 758 ntTSL 5 BASIC9.04□□□□□ -0.96
Nphp4P59240 AC140930.1-201ENSMUST00000221889 389 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 AC158521.1-202ENSMUST00000224352 645 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 A1cf-203ENSMUST00000224400 1204 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 AC154563.1-201ENSMUST00000228317 442 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 Ssmem1-202ENSMUST00000031798 1155 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nphp4P59240 Morc2a-202ENSMUST00000096441 4594 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
Nphp4P59240 Cyb5r2-201ENSMUST00000052438 2772 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nphp4P59240 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
Nphp4P59240 Slc5a9-202ENSMUST00000102720 3393 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nphp4P59240 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
Nphp4P59240 AC140393.3-201ENSMUST00000228396 1352 ntBASIC9.04□□□□□ -0.96
Nphp4P59240 Krr1-203ENSMUST00000163048 5023 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nphp4P59240 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nphp4P59240 Frem1-201ENSMUST00000071708 9307 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nphp4P59240 AC141476.1-201ENSMUST00000224988 3387 ntBASIC9.03□□□□□ -0.96
Nphp4P59240 Nqo2-202ENSMUST00000058978 3842 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nphp4P59240 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nphp4P59240 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nphp4P59240 Pitpnc1-201ENSMUST00000040380 5478 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nphp4P59240 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Nphp4P59240 Rbms3-202ENSMUST00000068962 3320 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nphp4P59240 Slc12a1-202ENSMUST00000110494 4740 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Nphp4P59240 Kat7-202ENSMUST00000092766 3414 ntTSL 5 BASIC9.03□□□□□ -0.96
Nphp4P59240 Gm5702-201ENSMUST00000185629 2469 ntBASIC9.03□□□□□ -0.96
Nphp4P59240 Il18r1-201ENSMUST00000087983 2826 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Nphp4P59240 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nphp4P59240 Sv2c-201ENSMUST00000161263 9101 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
Nphp4P59240 Gm7058-201ENSMUST00000119209 902 ntBASIC9.03□□□□□ -0.96
Nphp4P59240 Gm14054-201ENSMUST00000120744 704 ntBASIC9.03□□□□□ -0.96
Nphp4P59240 Gm12890-201ENSMUST00000120885 373 ntBASIC9.03□□□□□ -0.96
Nphp4P59240 Gm26023-201ENSMUST00000122722 313 ntBASIC9.03□□□□□ -0.96
Nphp4P59240 AI847159-203ENSMUST00000141786 915 ntTSL 2 BASIC9.03□□□□□ -0.96
Nphp4P59240 Gm23343-201ENSMUST00000158964 143 ntBASIC9.03□□□□□ -0.96
Nphp4P59240 Gm28996-201ENSMUST00000190316 721 ntBASIC9.03□□□□□ -0.96
Nphp4P59240 Snurf-201ENSMUST00000194059 216 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
Nphp4P59240 Csn2-202ENSMUST00000196163 722 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Nphp4P59240 Gm34078-201ENSMUST00000198202 744 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Nphp4P59240 Gm43098-201ENSMUST00000199989 1297 ntBASIC9.03□□□□□ -0.96
Nphp4P59240 Gm43263-201ENSMUST00000201619 560 ntTSL 5 BASIC9.03□□□□□ -0.96
Nphp4P59240 Gm44162-201ENSMUST00000203543 544 ntBASIC9.03□□□□□ -0.96
Nphp4P59240 Gm34263-202ENSMUST00000214353 303 ntTSL 5 BASIC9.03□□□□□ -0.96
Nphp4P59240 Akr1c13-201ENSMUST00000021634 1262 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nphp4P59240 AC151904.3-201ENSMUST00000219266 895 ntBASIC9.03□□□□□ -0.96
Nphp4P59240 Ccdc68-202ENSMUST00000080050 1235 ntAPPRIS ALT2 TSL 5 BASIC9.03□□□□□ -0.96
Nphp4P59240 Hyal5-202ENSMUST00000200968 2070 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nphp4P59240 Cenpw-202ENSMUST00000216853 4143 ntAPPRIS ALT1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nphp4P59240 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
Nphp4P59240 Gm37864-201ENSMUST00000195308 3075 ntBASIC9.03□□□□□ -0.96
Nphp4P59240 Olfr982-201ENSMUST00000054051 5576 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
Nphp4P59240 Olfr994-204ENSMUST00000217218 1460 ntAPPRIS P1 TSL 3 BASIC9.03□□□□□ -0.96
Nphp4P59240 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.96
Nphp4P59240 Gm16142-201ENSMUST00000130584 2850 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
Nphp4P59240 4921539H07Rik-201ENSMUST00000197200 2985 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nphp4P59240 D630023O14Rik-201ENSMUST00000191913 3099 ntBASIC9.02□□□□□ -0.97
Nphp4P59240 Gm14373-201ENSMUST00000122467 2158 ntBASIC9.02□□□□□ -0.97
Nphp4P59240 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
Nphp4P59240 Mylk3-203ENSMUST00000122452 3036 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
Nphp4P59240 Vmn2r16-201ENSMUST00000165180 2553 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Nphp4P59240 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
Retrieved 100 of 76,532 protein–RNA pairs in 134.4 ms