Protein–RNA interactions for Protein: P40201

Chd1, Chromodomain-helicase-DNA-binding protein 1, mousemouse

Predictions only

Length 1,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1P40201 Lama3-201ENSMUST00000092070 10548 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Chd1P40201 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Chd1P40201 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd1P40201 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Chd1P40201 Ofcc1-201ENSMUST00000054635 2816 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd1P40201 Parp11-201ENSMUST00000039680 3746 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd1P40201 Gm11217-201ENSMUST00000141162 1729 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Chd1P40201 Zfp445-201ENSMUST00000056467 2961 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd1P40201 Flna-203ENSMUST00000114299 8456 ntAPPRIS P2 TSL 5 BASIC9.94□□□□□ -0.82
Chd1P40201 Msantd4-201ENSMUST00000047173 2731 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Chd1P40201 Gm17491-201ENSMUST00000180411 2311 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 Smarca1-201ENSMUST00000077569 4024 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 Rtn3-202ENSMUST00000065304 5030 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 Lipe-203ENSMUST00000105177 1251 ntBASIC9.93□□□□□ -0.82
Chd1P40201 Gm14520-201ENSMUST00000119258 387 ntBASIC9.93□□□□□ -0.82
Chd1P40201 Gm12396-201ENSMUST00000121600 306 ntBASIC9.93□□□□□ -0.82
Chd1P40201 Gm23280-201ENSMUST00000157905 139 ntBASIC9.93□□□□□ -0.82
Chd1P40201 Gm26923-201ENSMUST00000182615 996 ntBASIC9.93□□□□□ -0.82
Chd1P40201 Gm9231-201ENSMUST00000220817 1009 ntBASIC9.93□□□□□ -0.82
Chd1P40201 AC168056.2-201ENSMUST00000223591 269 ntBASIC9.93□□□□□ -0.82
Chd1P40201 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Chd1P40201 Zbtb18-212ENSMUST00000195612 3790 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Chd1P40201 Lyg2-201ENSMUST00000078307 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 Zfp638-202ENSMUST00000113835 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Chd1P40201 Naalad2-201ENSMUST00000001826 2831 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 Gm42771-201ENSMUST00000198342 2486 ntBASIC9.93□□□□□ -0.82
Chd1P40201 Gprasp2-201ENSMUST00000113136 3736 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Chd1P40201 Zfp655-205ENSMUST00000199322 4157 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 Ctnna3-202ENSMUST00000105440 3682 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 Abca8b-202ENSMUST00000106669 5052 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 D630045J12Rik-206ENSMUST00000169256 10968 ntAPPRIS P2 TSL 5 BASIC9.93□□□□□ -0.82
Chd1P40201 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 Tmcc3-202ENSMUST00000117460 3217 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 Gm16423-201ENSMUST00000120078 947 ntBASIC9.93□□□□□ -0.82
Chd1P40201 Gm14300-201ENSMUST00000120800 946 ntBASIC9.93□□□□□ -0.82
Chd1P40201 Gm11197-201ENSMUST00000145158 839 ntBASIC9.93□□□□□ -0.82
Chd1P40201 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Chd1P40201 Gm43679-201ENSMUST00000197051 3677 ntBASIC9.93□□□□□ -0.82
Chd1P40201 Gm36448-201ENSMUST00000199916 438 ntBASIC9.93□□□□□ -0.82
Chd1P40201 Gm7832-201ENSMUST00000202613 880 ntBASIC9.93□□□□□ -0.82
Chd1P40201 Gm8863-201ENSMUST00000216630 926 ntBASIC9.93□□□□□ -0.82
Chd1P40201 A930023M06Rik-201ENSMUST00000223270 1093 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 1600015I10Rik-201ENSMUST00000031837 2485 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 Olfr1023-201ENSMUST00000056408 936 ntAPPRIS P1 BASIC9.93□□□□□ -0.82
Chd1P40201 Plcd4-202ENSMUST00000067916 4552 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Chd1P40201 Myh11-201ENSMUST00000090287 6632 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 Brd8-202ENSMUST00000097626 3005 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 Sec24c-201ENSMUST00000048657 4461 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Chd1P40201 1500004A13Rik-202ENSMUST00000183707 6054 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Chd1P40201 Olfr1508-202ENSMUST00000206520 5791 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Chd1P40201 Tns1-201ENSMUST00000169786 9966 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Chd1P40201 Sntg1-207ENSMUST00000140295 4887 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd1P40201 9330175E14Rik-201ENSMUST00000180445 4852 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Chd1P40201 Olfr378-201ENSMUST00000069790 1508 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Chd1P40201 Mir124a-1hg-201ENSMUST00000180610 4103 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Chd1P40201 Scn4a-201ENSMUST00000021056 6598 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd1P40201 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC9.92□□□□□ -0.82
Chd1P40201 Klb-201ENSMUST00000031096 3540 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd1P40201 Zfp275-201ENSMUST00000033731 6376 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd1P40201 Tln2-207ENSMUST00000215784 8330 ntAPPRIS ALT1 TSL 5 BASIC9.92□□□□□ -0.82
Chd1P40201 Galnt15-201ENSMUST00000022460 6326 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd1P40201 Sncaip-206ENSMUST00000178678 3724 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd1P40201 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC9.92□□□□□ -0.82
Chd1P40201 Gm20236-201ENSMUST00000193037 4540 ntBASIC9.92□□□□□ -0.82
Chd1P40201 Gm37094-201ENSMUST00000193352 4540 ntBASIC9.92□□□□□ -0.82
Chd1P40201 Gm12021-201ENSMUST00000121061 1746 ntBASIC9.92□□□□□ -0.82
Chd1P40201 Ank2-201ENSMUST00000044443 5775 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Chd1P40201 Col6a6-203ENSMUST00000166431 7098 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Chd1P40201 Gm5381-201ENSMUST00000117975 1250 ntBASIC9.92□□□□□ -0.82
Chd1P40201 Gm14796-201ENSMUST00000121216 959 ntBASIC9.92□□□□□ -0.82
Chd1P40201 Rnf32-211ENSMUST00000168460 1107 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd1P40201 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC9.92□□□□□ -0.82
Chd1P40201 AC134537.2-201ENSMUST00000217770 575 ntBASIC9.92□□□□□ -0.82
Chd1P40201 AC153870.1-201ENSMUST00000219599 560 ntBASIC9.92□□□□□ -0.82
Chd1P40201 Tmprss15-202ENSMUST00000060402 3681 ntAPPRIS ALT2 TSL 2 BASIC9.92□□□□□ -0.82
Chd1P40201 Phf24-202ENSMUST00000107975 6494 ntAPPRIS P1 TSL 2 BASIC9.92□□□□□ -0.82
Chd1P40201 Rrp12-201ENSMUST00000038677 4319 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Chd1P40201 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Chd1P40201 Gm19125-201ENSMUST00000188408 1383 ntBASIC9.92□□□□□ -0.82
Chd1P40201 Ank3-203ENSMUST00000092431 5823 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Chd1P40201 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Chd1P40201 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Chd1P40201 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC9.92□□□□□ -0.82
Chd1P40201 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd1P40201 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC9.91□□□□□ -0.82
Chd1P40201 Ern1-201ENSMUST00000001059 6946 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd1P40201 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd1P40201 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC9.91□□□□□ -0.82
Chd1P40201 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC9.91□□□□□ -0.82
Chd1P40201 Zscan4b-201ENSMUST00000168158 1754 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Chd1P40201 Flg2-201ENSMUST00000098884 7011 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Chd1P40201 Zdbf2-202ENSMUST00000114132 12629 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Chd1P40201 Xpo1-203ENSMUST00000102870 3471 ntAPPRIS P1 TSL 5 BASIC9.91□□□□□ -0.82
Chd1P40201 Gm22636-201ENSMUST00000158142 275 ntBASIC9.91□□□□□ -0.82
Chd1P40201 Tmem258-204ENSMUST00000166412 447 ntTSL 1 (best) BASIC9.91□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms