Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm14227-201ENSMUST00000119431 629 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Gm11617-201ENSMUST00000119609 639 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Gm15129-201ENSMUST00000119673 279 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Gm14900-201ENSMUST00000120304 733 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Snrp1c-ps2-201ENSMUST00000120976 365 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Gm11581-201ENSMUST00000122024 763 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Gm14717-201ENSMUST00000140450 649 ntTSL 3 BASIC5.36□□□□□ -1.55
Sdc1P18828 Gm14242-201ENSMUST00000145204 375 ntTSL 5 BASIC5.36□□□□□ -1.55
Sdc1P18828 Rrm2b-207ENSMUST00000146821 420 ntTSL 5 BASIC5.36□□□□□ -1.55
Sdc1P18828 Gm14061-201ENSMUST00000155923 1007 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Gm24039-201ENSMUST00000157878 132 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Gm9141-201ENSMUST00000159355 1007 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Sdc1P18828 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC5.36□□□□□ -1.55
Sdc1P18828 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.36□□□□□ -1.55
Sdc1P18828 Milr1-208ENSMUST00000183111 982 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 4933417E11Rik-201ENSMUST00000188213 1093 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Gm28180-201ENSMUST00000189608 722 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 1700020D05Rik-201ENSMUST00000189704 1021 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Sdc1P18828 1700096J18Rik-201ENSMUST00000190043 482 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 4833421G17Rik-201ENSMUST00000191704 844 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Gm37273-201ENSMUST00000195132 539 ntTSL 2 BASIC5.36□□□□□ -1.55
Sdc1P18828 Cacnb2-216ENSMUST00000195841 503 ntTSL 3 BASIC5.36□□□□□ -1.55
Sdc1P18828 4930580E04Rik-201ENSMUST00000197377 690 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Gm43192-201ENSMUST00000198002 637 ntTSL 3 BASIC5.36□□□□□ -1.55
Sdc1P18828 Gm43108-201ENSMUST00000200525 293 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Gm20052-204ENSMUST00000202443 648 ntTSL 2 BASIC5.36□□□□□ -1.55
Sdc1P18828 Gm44380-201ENSMUST00000203125 293 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Gm45156-201ENSMUST00000207255 439 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Gm44565-201ENSMUST00000208194 269 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Gm18655-201ENSMUST00000214802 1090 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Gm36855-202ENSMUST00000216439 754 ntTSL 3 BASIC5.36□□□□□ -1.55
Sdc1P18828 Gm8171-201ENSMUST00000217443 720 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 AC159238.1-201ENSMUST00000220699 343 ntTSL 3 BASIC5.36□□□□□ -1.55
Sdc1P18828 AC154838.3-201ENSMUST00000228876 965 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Npvf-201ENSMUST00000031853 812 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Mgat4d-201ENSMUST00000038692 1293 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Olfr730-201ENSMUST00000051453 957 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
Sdc1P18828 Spink14-201ENSMUST00000060328 566 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sdc1P18828 Ccdc54-201ENSMUST00000062439 1296 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Sdc1P18828 Gm24613-201ENSMUST00000083266 130 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Olfr597-201ENSMUST00000098203 948 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Sdc1P18828 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Sdc1P18828 Olfr740-202ENSMUST00000214792 4103 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sdc1P18828 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
Sdc1P18828 Gm13872-202ENSMUST00000143995 1408 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Sdc1P18828 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Ermard-201ENSMUST00000040594 1571 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Vmn1r6-202ENSMUST00000226689 8453 ntAPPRIS P2 BASIC5.36□□□□□ -1.55
Sdc1P18828 Gm43485-201ENSMUST00000199292 1710 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 AC159196.3-201ENSMUST00000224307 1841 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 AC161595.1-201ENSMUST00000216389 1993 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Gm42510-201ENSMUST00000196470 2258 ntBASIC5.36□□□□□ -1.55
Sdc1P18828 Gabra6-203ENSMUST00000155218 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 3110099E03Rik-202ENSMUST00000134580 2644 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Gm10648-201ENSMUST00000207552 2902 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Acad11-202ENSMUST00000120854 3108 ntTSL 5 BASIC5.36□□□□□ -1.55
Sdc1P18828 Zfp871-201ENSMUST00000057501 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Sdc1P18828 AC137871.4-201ENSMUST00000226323 3901 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc1P18828 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Sdc1P18828 Gykl1-201ENSMUST00000066193 1990 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Sdc1P18828 Gm3259-202ENSMUST00000160045 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc1P18828 C87414-201ENSMUST00000076321 1847 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc1P18828 Rnf219-202ENSMUST00000227640 1632 ntAPPRIS ALT2 BASIC5.35□□□□□ -1.55
Sdc1P18828 Aadat-202ENSMUST00000209338 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc1P18828 Vwc2l-201ENSMUST00000053922 4655 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc1P18828 4930402F06Rik-202ENSMUST00000113010 1372 ntAPPRIS P3 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc1P18828 Trav14-3-201ENSMUST00000103589 384 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Sdc1P18828 Trav14n-3-201ENSMUST00000103635 280 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Sdc1P18828 Tceal7-201ENSMUST00000113116 971 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc1P18828 Gm11911-201ENSMUST00000117938 1023 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Gm15040-201ENSMUST00000118561 1241 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Gm9516-201ENSMUST00000119684 424 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Gm14983-201ENSMUST00000121551 323 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Gm8093-203ENSMUST00000144982 1020 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc1P18828 Gm22214-201ENSMUST00000157563 172 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 2810442N19Rik-202ENSMUST00000161583 919 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc1P18828 A530032D15Rik-203ENSMUST00000161724 789 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
Sdc1P18828 Gm3208-201ENSMUST00000168281 427 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Gm17051-201ENSMUST00000170787 487 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Gm26381-201ENSMUST00000174895 92 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc1P18828 Mir6357-201ENSMUST00000184246 104 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Gm28801-201ENSMUST00000188761 449 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc1P18828 Gm37392-201ENSMUST00000192098 516 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 C030018K13Rik-201ENSMUST00000196527 866 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc1P18828 Gm38562-201ENSMUST00000199398 1126 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Sdc1P18828 Gm44971-201ENSMUST00000206192 337 ntBASIC5.35□□□□□ -1.55
Sdc1P18828 Gm45122-201ENSMUST00000206376 784 ntBASIC5.35□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms