Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Vmn1r40-205ENSMUST00000228642 2862 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 4930579H20Rik-201ENSMUST00000187815 1516 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Ccdc7a-201ENSMUST00000095158 1547 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Vmn1r184-205ENSMUST00000227790 4334 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Skiv2l2-201ENSMUST00000022281 3689 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 AC126549.1-201ENSMUST00000225044 3687 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Igkv4-81-201ENSMUST00000103340 290 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm22022-201ENSMUST00000104355 127 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Tmem91-202ENSMUST00000108404 485 ntTSL 5 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Smco3-202ENSMUST00000111894 1069 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm7206-201ENSMUST00000117730 508 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm14610-201ENSMUST00000118358 966 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm11910-201ENSMUST00000121624 432 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm15077-201ENSMUST00000122344 362 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm11739-201ENSMUST00000125269 723 ntTSL 3 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm13206-201ENSMUST00000129579 1090 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm11802-201ENSMUST00000137749 653 ntTSL 3 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm15124-201ENSMUST00000142053 953 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm12753-201ENSMUST00000152086 653 ntTSL 3 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm15389-201ENSMUST00000153774 666 ntTSL 3 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm13727-201ENSMUST00000154480 424 ntTSL 3 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Traj54-201ENSMUST00000165071 54 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm17097-201ENSMUST00000166414 714 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm13040-202ENSMUST00000169056 2104 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm7031-201ENSMUST00000173709 919 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Scgb2b20-201ENSMUST00000179248 523 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 4930535O05Rik-201ENSMUST00000184406 419 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Scgb2b18-201ENSMUST00000186529 523 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm28652-201ENSMUST00000187008 599 ntTSL 5 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Scgb2b11-201ENSMUST00000188293 523 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm29175-201ENSMUST00000189500 402 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 1700003L19Rik-201ENSMUST00000190074 746 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm18752-201ENSMUST00000192876 608 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Ighv8-2-201ENSMUST00000195037 359 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm43005-201ENSMUST00000199015 648 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Traf1-209ENSMUST00000201690 386 ntTSL 3 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm43004-201ENSMUST00000201872 703 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm44427-201ENSMUST00000204123 456 ntTSL 3 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Olfr1294-201ENSMUST00000208334 942 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm45607-201ENSMUST00000211143 678 ntTSL 3 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm19137-201ENSMUST00000213790 1164 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm3776-201ENSMUST00000217203 874 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm7762-201ENSMUST00000220595 604 ntTSL 3 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm40853-201ENSMUST00000221342 582 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm32300-201ENSMUST00000221735 515 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 CT030170.6-202ENSMUST00000223186 544 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm9255-201ENSMUST00000223225 581 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 AC166830.1-201ENSMUST00000224201 533 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Vmn1r6-201ENSMUST00000079669 1058 ntAPPRIS P2 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm24143-201ENSMUST00000082633 145 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Klk1b3-201ENSMUST00000085450 889 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Olfr74-201ENSMUST00000099840 957 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Mcm9-203ENSMUST00000219547 3168 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Alg11-202ENSMUST00000110737 4833 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 8430437L04Rik-201ENSMUST00000124829 1663 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm4806-201ENSMUST00000222704 1690 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Celf2-204ENSMUST00000114924 8738 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Myo1h-205ENSMUST00000169347 3545 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Mef2c-228ENSMUST00000199450 2862 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm16429-201ENSMUST00000179824 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 4931406B18Rik-203ENSMUST00000163619 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Hsdl2-202ENSMUST00000107528 2626 ntTSL 2 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Olfr845-203ENSMUST00000215572 3446 ntAPPRIS P1 TSL 3 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Wdr19-201ENSMUST00000041892 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Gm39327-201ENSMUST00000213594 1982 ntTSL 5 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Olfr1023-202ENSMUST00000213441 4740 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 AC154747.4-203ENSMUST00000225893 1384 ntBASIC6.57□□□□□ -1.36
Pcdh1F7BJK1 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Il1rl1-201ENSMUST00000053043 5053 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 4632404H12Rik-202ENSMUST00000195940 4671 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Zfp2-201ENSMUST00000109128 2782 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Rapgef4os3-201ENSMUST00000132792 3485 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Smim9-201ENSMUST00000101433 706 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm23485-201ENSMUST00000104181 155 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Olfr800-201ENSMUST00000104903 940 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Mup9-202ENSMUST00000118759 909 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm4342-201ENSMUST00000118982 367 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm13282-201ENSMUST00000121577 545 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm15178-201ENSMUST00000132100 472 ntTSL 5 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 4930403D09Rik-201ENSMUST00000147359 635 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm25266-201ENSMUST00000158521 304 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm8164-201ENSMUST00000169120 1192 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm4187-201ENSMUST00000172551 924 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm4133-201ENSMUST00000172989 924 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm5445-201ENSMUST00000180224 480 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Gm37322-201ENSMUST00000193409 337 ntBASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Pilrb2-202ENSMUST00000196162 969 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Pcdh1F7BJK1 Igkv8-34-201ENSMUST00000196959 365 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 54.5 ms