Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm9315-201ENSMUST00000222696 908 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 AC154515.3-201ENSMUST00000225081 1159 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 AC154461.5-201ENSMUST00000225429 774 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm26130-201ENSMUST00000083171 138 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm5446-201ENSMUST00000091762 784 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Pdzd9-202ENSMUST00000127845 1327 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Olfr1032-202ENSMUST00000079298 1442 ntAPPRIS P1 TSL 5 BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm37863-201ENSMUST00000194911 1457 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 C430042M11Rik-201ENSMUST00000180515 1617 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Epgn-201ENSMUST00000041516 1760 ntAPPRIS P2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm2309-201ENSMUST00000149994 1941 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Vmn2r-ps139-201ENSMUST00000190764 2057 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm37685-201ENSMUST00000193507 2177 ntBASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Slc16a4-201ENSMUST00000029502 2248 ntAPPRIS P3 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Gm5600-202ENSMUST00000211589 2331 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Smurf2-206ENSMUST00000167787 2358 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Platr25-201ENSMUST00000143260 2509 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Slamf1-201ENSMUST00000015460 2693 ntAPPRIS P1 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Slc4a4-203ENSMUST00000130041 3335 ntTSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Coro2a-203ENSMUST00000107757 4124 ntAPPRIS ALT2 TSL 1 (best) BASIC6.38□□□□□ -1.39
Trim3Q9R1R2 Trove2-202ENSMUST00000159879 8738 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Fmr1-204ENSMUST00000114655 4199 ntAPPRIS P5 TSL 5 BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Rgs22-203ENSMUST00000172831 4006 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Gm42940-201ENSMUST00000200361 2362 ntBASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Hapln1-201ENSMUST00000022108 5715 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Gm20716-201ENSMUST00000138667 5288 ntAPPRIS P1 TSL 2 BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Enpp6-201ENSMUST00000039840 4970 ntAPPRIS P2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Gm3072-201ENSMUST00000167712 1395 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Gimap9-201ENSMUST00000054050 1384 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Pum1-202ENSMUST00000097862 3991 ntAPPRIS ALT1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Gm12174-201ENSMUST00000119853 813 ntBASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Vamp7-ps-201ENSMUST00000120334 655 ntBASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Gm24157-201ENSMUST00000175265 111 ntBASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Rpp14-202ENSMUST00000180369 477 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Gm27178-201ENSMUST00000184962 340 ntBASIC6.37□□□□□ -1.39
Trim3Q9R1R2 1700003I22Rik-201ENSMUST00000186048 424 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Gm28991-201ENSMUST00000186584 543 ntTSL 5 BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Ms4a5-202ENSMUST00000186937 816 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Gm28492-201ENSMUST00000190899 1019 ntBASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Gm3511-201ENSMUST00000199823 204 ntBASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Gm4872-201ENSMUST00000205210 1299 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Rpl17-ps6-201ENSMUST00000222192 532 ntBASIC6.37□□□□□ -1.39
Trim3Q9R1R2 CT030184.2-201ENSMUST00000223064 263 ntBASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Smim15-202ENSMUST00000223808 808 ntAPPRIS P1 BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 AL837512.1-201ENSMUST00000223914 1073 ntBASIC6.37□□□□□ -1.39
Trim3Q9R1R2 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.37□□□□□ -1.39
Trim3Q9R1R2 AC137950.3-201ENSMUST00000228250 246 ntBASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Lgals2-201ENSMUST00000044584 590 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Ms4a5-201ENSMUST00000067673 1005 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Gm6419-201ENSMUST00000097166 429 ntBASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Defb18-201ENSMUST00000097818 258 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Gm26843-201ENSMUST00000212304 2859 ntTSL 5 BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Ccp110-201ENSMUST00000038650 4716 ntAPPRIS P1 TSL 5 BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Gm38322-201ENSMUST00000194074 2300 ntBASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Cavin4-201ENSMUST00000030033 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.39
Trim3Q9R1R2 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 5031410I06Rik-201ENSMUST00000063524 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Gm7347-201ENSMUST00000095004 2995 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Efcab2-201ENSMUST00000027775 3580 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Gm16123-201ENSMUST00000118647 1517 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Ptprd-219ENSMUST00000174531 4509 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Cct8-203ENSMUST00000175977 1470 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Gm28600-202ENSMUST00000189502 1495 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 AC155929.3-201ENSMUST00000217963 1428 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 2610044O15Rik8-202ENSMUST00000186619 2337 ntAPPRIS P1 TSL 2 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 CT030185.2-201ENSMUST00000222614 1310 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Akr1c20-202ENSMUST00000080361 1337 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Trdv2-2-201ENSMUST00000103678 397 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Gm25344-201ENSMUST00000104503 132 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Gm11689-201ENSMUST00000120766 302 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Gm22604-201ENSMUST00000157604 311 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Gm22728-201ENSMUST00000158087 129 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Mir1929-201ENSMUST00000158635 93 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Gm21839-201ENSMUST00000179536 378 ntBASIC6.36□□□□□ -1.39
Trim3Q9R1R2 4930467D21Rik-202ENSMUST00000181724 570 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Trim3Q9R1R2 Mir6908-201ENSMUST00000184056 63 ntBASIC6.36□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 72.4 ms