Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Phtf1-204ENSMUST00000117150 2921 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Mkks-201ENSMUST00000028730 2935 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Garnl3-201ENSMUST00000049618 3678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm18908-201ENSMUST00000207125 1483 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Cped1-202ENSMUST00000115383 5690 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 D030034A15Rik-201ENSMUST00000215835 3953 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Nemf-201ENSMUST00000021368 4732 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Odf2l-203ENSMUST00000098539 2261 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Lrrc51-208ENSMUST00000106968 766 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Fancl-202ENSMUST00000109509 1187 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm15000-201ENSMUST00000118275 1243 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm13463-201ENSMUST00000119020 233 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Vmn1r-ps92-201ENSMUST00000120775 517 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm15586-201ENSMUST00000121218 528 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm12754-201ENSMUST00000121908 454 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Taf1d-202ENSMUST00000164079 1005 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Vmn1r5-201ENSMUST00000164307 1056 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm2959-201ENSMUST00000169844 621 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm26179-201ENSMUST00000177723 132 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm27026-201ENSMUST00000183003 892 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm18800-202ENSMUST00000188688 1105 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm28437-201ENSMUST00000190277 783 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm18699-201ENSMUST00000190713 243 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm8924-201ENSMUST00000197405 1132 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 5033403H07Rik-202ENSMUST00000198248 756 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Shisa5-214ENSMUST00000198708 771 ntTSL 5 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm21040-201ENSMUST00000199493 1132 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm8921-201ENSMUST00000204306 649 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Olfr1284-202ENSMUST00000209096 1064 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm32005-201ENSMUST00000212446 959 ntTSL 5 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm39329-201ENSMUST00000215849 798 ntTSL 5 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm4796-201ENSMUST00000219802 624 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm18591-201ENSMUST00000220568 763 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 AC131710.2-201ENSMUST00000226773 683 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 CT009556.4-201ENSMUST00000227092 200 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 AC116596.2-203ENSMUST00000227345 731 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 AC136376.1-201ENSMUST00000228496 950 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Serpinb3d-201ENSMUST00000023861 1216 ntAPPRIS P1 TSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Klrk1-201ENSMUST00000032252 1270 ntAPPRIS P4 TSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Olfr902-201ENSMUST00000050733 1056 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Olfr248-201ENSMUST00000075329 1010 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Olfr1287-201ENSMUST00000075390 918 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Lats2-203ENSMUST00000077981 786 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gpr15-201ENSMUST00000089318 1290 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Olfr1044-201ENSMUST00000099906 945 ntAPPRIS P1 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Zfp239-207ENSMUST00000172088 2812 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Zc3h12b-201ENSMUST00000082183 2831 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Tll2-201ENSMUST00000025986 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm3563-201ENSMUST00000172963 1628 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm17039-201ENSMUST00000165145 4901 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm42852-201ENSMUST00000202649 1379 ntBASIC6.68□□□□□ -1.34
Clrn1Q8K445 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC6.68□□□□□ -1.34
Clrn1Q8K445 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Clrn1Q8K445 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 Adgrf5-206ENSMUST00000226087 4954 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm42577-201ENSMUST00000201367 3211 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 Psg18-202ENSMUST00000098783 1783 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm8276-201ENSMUST00000192231 1812 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 Cyp2c39-201ENSMUST00000025968 1817 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Oxsm-203ENSMUST00000112625 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Zfp78-203ENSMUST00000207314 4675 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Mpdz-202ENSMUST00000107258 7241 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 4933409F18Rik-202ENSMUST00000222026 1584 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm10401-201ENSMUST00000100848 607 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Mir688-201ENSMUST00000102055 75 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 Ifna14-201ENSMUST00000102808 570 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Vmn1r-ps123-201ENSMUST00000110449 237 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm15194-201ENSMUST00000120453 434 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm13754-201ENSMUST00000120486 998 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm15792-201ENSMUST00000137099 769 ntTSL 3 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm11626-201ENSMUST00000142107 333 ntTSL 3 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm16573-201ENSMUST00000160334 801 ntTSL 3 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Mir5100-201ENSMUST00000174993 64 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm26944-201ENSMUST00000182265 633 ntTSL 3 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Mir7084-201ENSMUST00000183876 70 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm27617-201ENSMUST00000184321 168 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm28556-201ENSMUST00000187489 673 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm36974-201ENSMUST00000194200 1071 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm33370-201ENSMUST00000195935 489 ntTSL 2 BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm43725-201ENSMUST00000200122 369 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 Clec2j-202ENSMUST00000203658 606 ntBASIC6.67□□□□□ -1.34
Clrn1Q8K445 Ldhc-204ENSMUST00000210585 1071 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 4930486F22Rik-201ENSMUST00000218077 559 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Clrn1Q8K445 Gm8633-201ENSMUST00000218457 558 ntTSL 3 BASIC6.67□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 121.5 ms