Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 4930448H16Rik-201ENSMUST00000159838 580 ntTSL 5 BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm44930-201ENSMUST00000207545 489 ntTSL 5 BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Stx3-206ENSMUST00000211047 870 ntTSL 5 BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 CT030645.2-201ENSMUST00000224321 1012 ntBASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm8256-203ENSMUST00000228692 591 ntBASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm5582-201ENSMUST00000075251 522 ntBASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm24924-201ENSMUST00000084007 164 ntBASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 1700034E13Rik-201ENSMUST00000091904 439 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 1700026J12Rik-201ENSMUST00000098226 1127 ntTSL 5 BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Prom1-201ENSMUST00000030973 2598 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Vmn2r-ps115-201ENSMUST00000177393 1809 ntBASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Tm9sf4-201ENSMUST00000089027 3896 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Robo2-210ENSMUST00000226478 8059 ntBASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 4930422C21Rik-201ENSMUST00000212419 2362 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Olfr770-203ENSMUST00000204250 1644 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm5841-201ENSMUST00000195307 2177 ntBASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 9330199G10Rik-201ENSMUST00000221601 2072 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Fut9-201ENSMUST00000084770 12134 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm15721-201ENSMUST00000138406 3308 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm13821-201ENSMUST00000202029 3201 ntBASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Fam193a-201ENSMUST00000094867 3696 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Ptch1-202ENSMUST00000192155 7002 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 1700024B05Rik-202ENSMUST00000168972 1573 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Lrguk-204ENSMUST00000228187 10475 ntAPPRIS ALT2 BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm11590-201ENSMUST00000118999 1455 ntBASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Apol10a-202ENSMUST00000119997 2286 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Tsix-201ENSMUST00000152916 4306 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm29113-201ENSMUST00000185991 3432 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Cdh8-203ENSMUST00000128860 4594 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 C87499-202ENSMUST00000107142 672 ntAPPRIS ALT2 TSL 2 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm8424-201ENSMUST00000117716 988 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm15616-201ENSMUST00000118662 375 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm16057-201ENSMUST00000120811 759 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Rps12-ps20-201ENSMUST00000121168 402 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm12119-201ENSMUST00000136083 700 ntTSL 3 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm25433-201ENSMUST00000158283 286 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm26211-201ENSMUST00000158578 129 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm3076-201ENSMUST00000161613 451 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm17660-202ENSMUST00000178967 337 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Rps12-ps23-201ENSMUST00000179414 402 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm37187-201ENSMUST00000193425 341 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm45899-201ENSMUST00000212196 1276 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Klrc3-201ENSMUST00000071149 715 ntAPPRIS P2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Olfr516-201ENSMUST00000071410 945 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm18879-201ENSMUST00000221187 1537 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Selp-205ENSMUST00000162746 3438 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Rab8b-201ENSMUST00000041139 4733 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Ipcef1-203ENSMUST00000105617 6041 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Itih5-201ENSMUST00000026886 7900 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm42864-201ENSMUST00000198371 1436 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Olfr1045-202ENSMUST00000215763 2960 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Ifi202b-201ENSMUST00000000266 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Arpp21-202ENSMUST00000070218 3181 ntTSL 5 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Piwil2-201ENSMUST00000048129 4916 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Dmtf1-202ENSMUST00000095017 3498 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Olfr193-203ENSMUST00000208455 2855 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Rag1-201ENSMUST00000078494 6608 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm6494-201ENSMUST00000218604 2298 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Fryl-202ENSMUST00000101127 11340 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm2762-207ENSMUST00000202739 2665 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm22371-201ENSMUST00000104588 130 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Csnk2a1-ps-201ENSMUST00000118846 1175 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Zfp286os-201ENSMUST00000128292 713 ntTSL 3 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 A330102I10Rik-203ENSMUST00000145801 737 ntTSL 5 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm26037-201ENSMUST00000158150 311 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm17201-201ENSMUST00000167226 390 ntTSL 5 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Adam3-210ENSMUST00000171611 1202 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm18430-201ENSMUST00000197534 682 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm42886-201ENSMUST00000199214 466 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 AC154634.2-201ENSMUST00000225983 1184 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Olfr11-201ENSMUST00000043081 942 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Gm8526-201ENSMUST00000079153 475 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Olfr1085-201ENSMUST00000099879 942 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Fam49a-202ENSMUST00000069066 9452 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Olfr669-203ENSMUST00000214260 2336 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Zmat4-206ENSMUST00000207301 4207 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Pdlim5-203ENSMUST00000090134 1722 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 AC132596.1-201ENSMUST00000223043 2263 ntTSL 5 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Olfr325-202ENSMUST00000203418 1649 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
Col6a6Q8C6K9 Olfr452-203ENSMUST00000215719 2728 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Fer1l6-203ENSMUST00000161028 5714 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Col6a6Q8C6K9 Brox-202ENSMUST00000163528 3413 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 99.4 ms