Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Gm7394-201ENSMUST00000209138 1032 ntBASIC9.81□□□□□ -0.84
Clcn1Q64347 AC162176.1-201ENSMUST00000216490 618 ntBASIC9.81□□□□□ -0.84
Clcn1Q64347 Gm6667-201ENSMUST00000217169 564 ntBASIC9.81□□□□□ -0.84
Clcn1Q64347 AC120002.1-201ENSMUST00000218456 331 ntBASIC9.81□□□□□ -0.84
Clcn1Q64347 Gm2544-201ENSMUST00000222702 756 ntBASIC9.81□□□□□ -0.84
Clcn1Q64347 AC154785.1-201ENSMUST00000223280 572 ntBASIC9.81□□□□□ -0.84
Clcn1Q64347 CT010480.5-201ENSMUST00000225026 217 ntBASIC9.81□□□□□ -0.84
Clcn1Q64347 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC9.81□□□□□ -0.84
Clcn1Q64347 Ino80c-201ENSMUST00000055012 909 ntTSL 5 BASIC9.81□□□□□ -0.84
Clcn1Q64347 Olfr101-201ENSMUST00000058046 1039 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Clcn1Q64347 Gm5426-201ENSMUST00000074615 312 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Clcn1Q64347 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Clcn1Q64347 Kcnma1-224ENSMUST00000224077 3537 ntAPPRIS ALT2 BASIC9.81□□□□□ -0.84
Clcn1Q64347 Greb1-203ENSMUST00000159120 6346 ntAPPRIS ALT2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clcn1Q64347 Ndrg3-202ENSMUST00000072298 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clcn1Q64347 Paqr8-201ENSMUST00000068880 4704 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clcn1Q64347 Gm44950-201ENSMUST00000206403 2296 ntBASIC9.81□□□□□ -0.84
Clcn1Q64347 Efl1-206ENSMUST00000207868 1537 ntTSL 3 BASIC9.81□□□□□ -0.84
Clcn1Q64347 Nkrf-201ENSMUST00000057093 3268 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clcn1Q64347 Vmn1r5-203ENSMUST00000228276 3188 ntAPPRIS P1 BASIC9.81□□□□□ -0.84
Clcn1Q64347 Olfr943-204ENSMUST00000213830 8305 ntAPPRIS ALT2 TSL 3 BASIC9.81□□□□□ -0.84
Clcn1Q64347 Trappc2-202ENSMUST00000112194 1418 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Clcn1Q64347 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clcn1Q64347 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC9.81□□□□□ -0.84
Clcn1Q64347 Gm44777-202ENSMUST00000206492 1889 ntTSL 5 BASIC9.81□□□□□ -0.84
Clcn1Q64347 Acad11-201ENSMUST00000047799 3444 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clcn1Q64347 Trim66-203ENSMUST00000106741 4417 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Clcn1Q64347 Gm3883-201ENSMUST00000098119 3229 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Rbm12-201ENSMUST00000059647 6667 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clcn1Q64347 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Zfp979-202ENSMUST00000105720 2594 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Serpinb8-201ENSMUST00000000514 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clcn1Q64347 2600014E21Rik-201ENSMUST00000186411 4805 ntTSL 5 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Olfr1465-202ENSMUST00000207340 1561 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Fktn-201ENSMUST00000061771 3370 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm42981-201ENSMUST00000200184 3252 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Cyp2j11-201ENSMUST00000015368 1917 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clcn1Q64347 Dppa2-201ENSMUST00000097175 1948 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clcn1Q64347 Cdh8-207ENSMUST00000155527 3159 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Clcn1Q64347 Spata1-202ENSMUST00000093951 2712 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Clcn1Q64347 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clcn1Q64347 Dip2b-201ENSMUST00000023768 4323 ntTSL 5 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Grik2-204ENSMUST00000218441 3083 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Clcn1Q64347 Ift122-202ENSMUST00000112923 3765 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm36993-201ENSMUST00000192983 2980 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm6284-201ENSMUST00000209609 4287 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm10376-201ENSMUST00000100694 555 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Trav13n-4-201ENSMUST00000103634 267 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Eif3m-202ENSMUST00000111110 817 ntTSL 5 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm15010-201ENSMUST00000117153 407 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm7974-201ENSMUST00000117154 408 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm13921-201ENSMUST00000119411 463 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm14485-201ENSMUST00000119489 493 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm11955-201ENSMUST00000119801 470 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm13586-201ENSMUST00000121784 464 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Rpl29-203ENSMUST00000150576 733 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm15787-207ENSMUST00000152014 885 ntTSL 2 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Atp2b4-208ENSMUST00000167348 243 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm20429-202ENSMUST00000174168 820 ntTSL 3 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm38181-201ENSMUST00000181357 720 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm26652-202ENSMUST00000181672 475 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm27317-201ENSMUST00000183533 95 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm21877-201ENSMUST00000185640 694 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm5835-201ENSMUST00000185806 1270 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm6472-202ENSMUST00000187973 582 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm37889-201ENSMUST00000194174 251 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm43840-201ENSMUST00000199444 484 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm18765-201ENSMUST00000203166 660 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm44129-201ENSMUST00000203511 675 ntTSL 3 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Olfr1435-ps1-201ENSMUST00000207773 249 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm34783-201ENSMUST00000209159 303 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm2225-201ENSMUST00000209570 377 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC9.8□□□□□ -0.84
Clcn1Q64347 AC124510.2-201ENSMUST00000221958 683 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Olfr202-201ENSMUST00000049859 924 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm24696-201ENSMUST00000083878 134 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm42656-201ENSMUST00000201506 2305 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clcn1Q64347 Tbc1d24-216ENSMUST00000202925 4216 ntTSL 5 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Extl2-203ENSMUST00000106502 2840 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clcn1Q64347 Sec16b-203ENSMUST00000111700 4369 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clcn1Q64347 Taf1-202ENSMUST00000118878 7210 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm8232-201ENSMUST00000164277 1402 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm43154-208ENSMUST00000209658 1442 ntTSL 5 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Itsn1-208ENSMUST00000114002 14012 ntAPPRIS P2 TSL 5 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Muc13-202ENSMUST00000115044 2969 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm44228-201ENSMUST00000204888 2026 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 Parp6-202ENSMUST00000050483 2631 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Clcn1Q64347 Olfr1043-202ENSMUST00000213886 1675 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Clcn1Q64347 Gm37496-201ENSMUST00000191930 2509 ntBASIC9.8□□□□□ -0.84
Clcn1Q64347 D730048I06Rik-201ENSMUST00000034619 1334 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Clcn1Q64347 Hmg20a-203ENSMUST00000214771 3191 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Clcn1Q64347 Alkbh8-206ENSMUST00000212294 2584 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Clcn1Q64347 Birc2-204ENSMUST00000190341 3331 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Clcn1Q64347 Olfr119-202ENSMUST00000213732 1722 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Clcn1Q64347 Gm36011-201ENSMUST00000208671 2719 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Clcn1Q64347 A330008L17Rik-201ENSMUST00000064349 3220 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Clcn1Q64347 Satb1-203ENSMUST00000129667 2896 ntAPPRIS P2 TSL 5 BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 86.5 ms