Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 Gm27219-201ENSMUST00000184633 742 ntBASIC9.31□□□□□ -0.92
Nkx2-3P97334 Gm27804-201ENSMUST00000185135 119 ntBASIC9.31□□□□□ -0.92
Nkx2-3P97334 Gm28070-201ENSMUST00000191502 445 ntBASIC9.31□□□□□ -0.92
Nkx2-3P97334 Gm37884-201ENSMUST00000191857 818 ntBASIC9.31□□□□□ -0.92
Nkx2-3P97334 Gm37770-201ENSMUST00000192855 772 ntBASIC9.31□□□□□ -0.92
Nkx2-3P97334 Gm5995-201ENSMUST00000204107 1273 ntBASIC9.31□□□□□ -0.92
Nkx2-3P97334 Smarcad1-215ENSMUST00000205118 600 ntTSL 2 BASIC9.31□□□□□ -0.92
Nkx2-3P97334 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC9.31□□□□□ -0.92
Nkx2-3P97334 Olfr950-ps1-201ENSMUST00000213804 878 ntBASIC9.31□□□□□ -0.92
Nkx2-3P97334 Gm18160-201ENSMUST00000214279 827 ntBASIC9.31□□□□□ -0.92
Nkx2-3P97334 AC153957.1-201ENSMUST00000215235 229 ntBASIC9.31□□□□□ -0.92
Nkx2-3P97334 Spata31-202ENSMUST00000221202 814 ntTSL 5 BASIC9.31□□□□□ -0.92
Nkx2-3P97334 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Nkx2-3P97334 AC159188.3-201ENSMUST00000224199 880 ntBASIC9.31□□□□□ -0.92
Nkx2-3P97334 AC123533.2-201ENSMUST00000228176 375 ntBASIC9.31□□□□□ -0.92
Nkx2-3P97334 Orm1-201ENSMUST00000030044 775 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nkx2-3P97334 Gm9985-201ENSMUST00000044101 510 ntBASIC9.31□□□□□ -0.92
Nkx2-3P97334 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Nkx2-3P97334 Rpl36a-ps1-201ENSMUST00000081987 449 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Nkx2-3P97334 Gm3512-201ENSMUST00000090663 441 ntTSL 5 BASIC9.31□□□□□ -0.92
Nkx2-3P97334 Olfr654-201ENSMUST00000098173 1155 ntBASIC9.31□□□□□ -0.92
Nkx2-3P97334 CT025675.1-201ENSMUST00000228171 1567 ntBASIC9.31□□□□□ -0.92
Nkx2-3P97334 4933431G14Rik-201ENSMUST00000205571 1670 ntTSL 1 (best) BASIC9.31□□□□□ -0.92
Nkx2-3P97334 Vmn1r8-203ENSMUST00000228690 1699 ntAPPRIS P1 BASIC9.31□□□□□ -0.92
Nkx2-3P97334 Srgap3-203ENSMUST00000113169 8300 ntTSL 5 BASIC9.31□□□□□ -0.92
Nkx2-3P97334 Gm37043-201ENSMUST00000194609 3105 ntBASIC9.31□□□□□ -0.92
Nkx2-3P97334 Zfp955b-201ENSMUST00000099414 1638 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nkx2-3P97334 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nkx2-3P97334 Gatad2b-205ENSMUST00000199754 7438 ntAPPRIS P1 TSL 5 BASIC9.31□□□□□ -0.92
Nkx2-3P97334 Epb41l2-202ENSMUST00000092645 4280 ntAPPRIS P2 TSL 5 BASIC9.31□□□□□ -0.92
Nkx2-3P97334 Lars2-201ENSMUST00000038863 3894 ntAPPRIS P1 TSL 1 (best) BASIC9.31□□□□□ -0.92
Nkx2-3P97334 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Cxcl9-201ENSMUST00000113093 2889 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 9230020A06Rik-201ENSMUST00000151841 2051 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 AC130219.1-201ENSMUST00000228406 3433 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Gm37124-201ENSMUST00000192140 1992 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Nos1-202ENSMUST00000102557 4591 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Plekha6-202ENSMUST00000105082 7085 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 BC147527-202ENSMUST00000225029 1595 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Cfap69-210ENSMUST00000196165 4408 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Olfr1181-202ENSMUST00000102619 1240 ntAPPRIS P1 TSL 3 BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Trav12n-1-201ENSMUST00000103587 344 ntAPPRIS ALT2 BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Gm13084-202ENSMUST00000105769 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Gm14879-201ENSMUST00000117308 507 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Gm14621-201ENSMUST00000117709 689 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Gm4914-201ENSMUST00000119757 459 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Gm13121-201ENSMUST00000120637 632 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Gm13440-201ENSMUST00000121665 496 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Gm13837-201ENSMUST00000126326 337 ntTSL 3 BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Gm15656-201ENSMUST00000132076 615 ntTSL 3 BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Ear-ps10-201ENSMUST00000161871 460 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Vmn2r-ps80-201ENSMUST00000173697 914 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Mir3078-201ENSMUST00000175231 87 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Vmn1r-ps152-201ENSMUST00000176452 699 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Gm10715-202ENSMUST00000177969 681 ntAPPRIS P5 TSL 5 BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Trav12d-1-202ENSMUST00000183652 344 ntAPPRIS ALT2 BASIC9.3□□□□□ -0.92
Nkx2-3P97334 1700111N16Rik-201ENSMUST00000188663 1133 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Gm17967-201ENSMUST00000195319 647 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Gm7733-201ENSMUST00000199038 919 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Gm2860-201ENSMUST00000199226 707 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Gm44287-201ENSMUST00000203069 290 ntTSL 3 BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Reg1-202ENSMUST00000204601 766 ntAPPRIS P1 TSL 5 BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Gm8035-201ENSMUST00000204625 687 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC9.3□□□□□ -0.92
Nkx2-3P97334 AC166358.6-201ENSMUST00000221834 1206 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Olfr849-201ENSMUST00000063923 939 ntAPPRIS P1 BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Mup14-202ENSMUST00000075206 925 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Mir463-201ENSMUST00000093570 75 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Slc2a9-203ENSMUST00000067886 3602 ntAPPRIS P4 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 A330015K06Rik-201ENSMUST00000195489 4286 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Eif2ak4-202ENSMUST00000102527 4906 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 AC155298.3-201ENSMUST00000225307 3220 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Ace2-202ENSMUST00000112271 3578 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Skint5-204ENSMUST00000171627 1611 ntTSL 5 BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Gm20749-201ENSMUST00000186319 3492 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Polr3a-201ENSMUST00000026322 4687 ntAPPRIS P1 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Gm9408-201ENSMUST00000197375 1505 ntBASIC9.3□□□□□ -0.92
Nkx2-3P97334 Olfr1294-202ENSMUST00000208675 1983 ntAPPRIS P1 TSL 2 BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Usp8-202ENSMUST00000110416 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Pcdh15-226ENSMUST00000151116 6287 ntAPPRIS ALT2 TSL 5 BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Ehbp1-207ENSMUST00000180360 4971 ntAPPRIS P3 TSL 5 BASIC9.3□□□□□ -0.92
Nkx2-3P97334 Tmod2-206ENSMUST00000215036 1797 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nkx2-3P97334 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nkx2-3P97334 Zfp663-202ENSMUST00000103085 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nkx2-3P97334 Zfp445-206ENSMUST00000216063 6189 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nkx2-3P97334 Rabep1-207ENSMUST00000178245 2460 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nkx2-3P97334 Rabep1-202ENSMUST00000081362 2469 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nkx2-3P97334 Pfkfb2-203ENSMUST00000169659 2849 ntAPPRIS P3 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nkx2-3P97334 AI314278-202ENSMUST00000209026 2373 ntTSL 1 (best) BASIC9.29□□□□□ -0.92
Nkx2-3P97334 Nae1-211ENSMUST00000162466 1735 ntTSL 5 BASIC9.29□□□□□ -0.92
Nkx2-3P97334 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Nkx2-3P97334 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC9.29□□□□□ -0.92
Retrieved 100 of 76,532 protein–RNA pairs in 70.3 ms