Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm33728-201ENSMUST00000217285 546 ntTSL 3 BASIC9.06□□□□□ -0.96
Nphp4P59240 AC073562.1-201ENSMUST00000222117 401 ntBASIC9.06□□□□□ -0.96
Nphp4P59240 AC139197.1-201ENSMUST00000228332 813 ntBASIC9.06□□□□□ -0.96
Nphp4P59240 Prl7a2-201ENSMUST00000006660 1277 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nphp4P59240 n-R5s56-201ENSMUST00000082521 105 ntBASIC9.06□□□□□ -0.96
Nphp4P59240 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nphp4P59240 A830082K12Rik-207ENSMUST00000183171 4176 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Nphp4P59240 Slc15a2-208ENSMUST00000165531 2158 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Nphp4P59240 Gm38284-201ENSMUST00000194803 4539 ntBASIC9.06□□□□□ -0.96
Nphp4P59240 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Nphp4P59240 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nphp4P59240 Gm37653-201ENSMUST00000195401 3578 ntBASIC9.06□□□□□ -0.96
Nphp4P59240 Zfp385b-211ENSMUST00000171063 2668 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
Nphp4P59240 Fmr1-203ENSMUST00000114654 4061 ntAPPRIS ALT1 TSL 5 BASIC9.06□□□□□ -0.96
Nphp4P59240 Ikbkg-206ENSMUST00000114130 6736 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Nphp4P59240 Akap2-206ENSMUST00000107598 6830 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Nphp4P59240 Gm38155-201ENSMUST00000192285 2763 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Nphp4P59240 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nphp4P59240 Vmn1r44-204ENSMUST00000226171 1877 ntBASIC9.06□□□□□ -0.96
Nphp4P59240 Svil-210ENSMUST00000140448 7423 ntAPPRIS P3 TSL 5 BASIC9.06□□□□□ -0.96
Nphp4P59240 C030034L19Rik-201ENSMUST00000180874 2032 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Nphp4P59240 Maats1-202ENSMUST00000114740 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC9.06□□□□□ -0.96
Nphp4P59240 E230015B07Rik-202ENSMUST00000159884 2822 ntTSL 1 (best) BASIC9.06□□□□□ -0.96
Nphp4P59240 Vmn2r-ps103-201ENSMUST00000222960 2349 ntBASIC9.06□□□□□ -0.96
Nphp4P59240 Gm21036-201ENSMUST00000207544 2611 ntBASIC9.06□□□□□ -0.96
Nphp4P59240 Cdh23-203ENSMUST00000105462 10592 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Nphp4P59240 Trappc8-201ENSMUST00000025177 5178 ntAPPRIS ALT2 TSL 5 BASIC9.06□□□□□ -0.96
Nphp4P59240 Gm14496-201ENSMUST00000071760 2550 ntAPPRIS P1 TSL 5 BASIC9.06□□□□□ -0.96
Nphp4P59240 Gm23311-201ENSMUST00000104152 134 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Myl2-202ENSMUST00000111750 729 ntTSL 2 BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm22103-201ENSMUST00000116733 121 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm26475-201ENSMUST00000116769 121 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm23620-201ENSMUST00000116812 121 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm25042-201ENSMUST00000116856 121 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm25540-201ENSMUST00000116880 121 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm13137-201ENSMUST00000118035 345 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm11256-201ENSMUST00000118109 829 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm12181-201ENSMUST00000121448 531 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm23884-201ENSMUST00000122687 294 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm14974-201ENSMUST00000139112 804 ntTSL 3 BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm23386-201ENSMUST00000158585 144 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm10177-201ENSMUST00000160052 444 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Olfr92-201ENSMUST00000168659 939 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Nphp4P59240 Kcnj13-202ENSMUST00000174179 261 ntTSL 5 BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm20738-201ENSMUST00000177666 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm23550-201ENSMUST00000179003 121 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm25123-201ENSMUST00000179154 121 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm25353-201ENSMUST00000179366 121 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm22992-201ENSMUST00000179496 121 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm25892-201ENSMUST00000179867 121 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm20823-201ENSMUST00000179949 1231 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm24092-201ENSMUST00000180257 121 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm20865-202ENSMUST00000181163 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm29049-201ENSMUST00000185705 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm20816-202ENSMUST00000187846 1225 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm20809-202ENSMUST00000187943 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm21728-201ENSMUST00000188442 695 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm21889-201ENSMUST00000188487 695 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm20932-201ENSMUST00000189115 694 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm21721-202ENSMUST00000189253 1225 ntAPPRIS P1 TSL 3 BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm21920-201ENSMUST00000190042 695 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm20867-202ENSMUST00000190987 1224 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Klk1b10-ps-201ENSMUST00000205895 783 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm18805-201ENSMUST00000206872 655 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 AC153566.2-201ENSMUST00000213841 330 ntTSL 5 BASIC9.05□□□□□ -0.96
Nphp4P59240 AC135353.1-201ENSMUST00000215330 630 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 AC133207.2-201ENSMUST00000218430 237 ntTSL 5 BASIC9.05□□□□□ -0.96
Nphp4P59240 AC116591.1-201ENSMUST00000227919 351 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Olfr1076-201ENSMUST00000076263 942 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Nphp4P59240 Lmbrd1-201ENSMUST00000095062 5228 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Tiam1-213ENSMUST00000163370 7255 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Ugt2b37-201ENSMUST00000075858 1894 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Exoc1-201ENSMUST00000049469 3272 ntAPPRIS ALT1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Slc17a4-202ENSMUST00000110407 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm44178-201ENSMUST00000205229 2930 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Rp1-203ENSMUST00000208660 4170 ntAPPRIS P1 TSL 5 BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm28175-202ENSMUST00000209336 1477 ntTSL 5 BASIC9.05□□□□□ -0.96
Nphp4P59240 Gadl1-201ENSMUST00000069651 3652 ntAPPRIS P2 TSL 5 BASIC9.05□□□□□ -0.96
Nphp4P59240 Mgat4a-206ENSMUST00000154819 2796 ntTSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 AC164978.1-201ENSMUST00000228608 4011 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Tmem161b-201ENSMUST00000057495 2857 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Vmn2r3-202ENSMUST00000176328 2748 ntAPPRIS ALT2 TSL 5 BASIC9.05□□□□□ -0.96
Nphp4P59240 Exoc4-201ENSMUST00000052266 4824 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm9112-201ENSMUST00000113610 420 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Nphp4P59240 Scgb2b23-ps-201ENSMUST00000122094 330 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm13166-203ENSMUST00000144166 326 ntTSL 3 BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm25117-201ENSMUST00000157194 144 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Gm45844-201ENSMUST00000173842 451 ntAPPRIS ALT2 TSL 3 BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm22548-201ENSMUST00000174899 78 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Ccl27b-201ENSMUST00000177785 425 ntAPPRIS P1 TSL 1 (best) BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm9274-201ENSMUST00000182505 984 ntBASIC9.05□□□□□ -0.96
Nphp4P59240 Anapc13-202ENSMUST00000186693 595 ntAPPRIS P1 TSL 2 BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm29587-201ENSMUST00000189898 332 ntTSL 5 BASIC9.05□□□□□ -0.96
Nphp4P59240 Olfr374-201ENSMUST00000209675 1053 ntAPPRIS P1 BASIC9.05□□□□□ -0.96
Nphp4P59240 Gm36231-201ENSMUST00000211183 217 ntTSL 5 BASIC9.05□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 137.1 ms