Protein–RNA interactions for Protein: P06344

H-2 class II histocompatibility antigen, A-U beta chain, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06344 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC6.04□□□□□ -1.44
P06344 Gm37383-201ENSMUST00000191750 745 ntBASIC6.04□□□□□ -1.44
P06344 Gm17895-201ENSMUST00000194028 874 ntBASIC6.04□□□□□ -1.44
P06344 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC6.04□□□□□ -1.44
P06344 Gm44111-201ENSMUST00000204649 399 ntBASIC6.04□□□□□ -1.44
P06344 Gm34368-201ENSMUST00000209512 1111 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
P06344 Gm33586-201ENSMUST00000210768 892 ntTSL 3 BASIC6.04□□□□□ -1.44
P06344 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC6.04□□□□□ -1.44
P06344 Olfr108-202ENSMUST00000218675 1038 ntAPPRIS P2 BASIC6.04□□□□□ -1.44
P06344 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.04□□□□□ -1.44
P06344 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.04□□□□□ -1.44
P06344 Gm33489-201ENSMUST00000223171 673 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
P06344 AC133598.3-204ENSMUST00000224260 767 ntBASIC6.04□□□□□ -1.44
P06344 AC165106.1-201ENSMUST00000227580 408 ntBASIC6.04□□□□□ -1.44
P06344 AC137950.3-201ENSMUST00000228250 246 ntBASIC6.04□□□□□ -1.44
P06344 Olfr108-201ENSMUST00000078207 1038 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
P06344 Itih5l-ps-201ENSMUST00000145639 3964 ntBASIC6.04□□□□□ -1.44
P06344 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
P06344 Vmn1r198-204ENSMUST00000227167 5990 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
P06344 Trappc8-206ENSMUST00000225661 5191 ntAPPRIS ALT2 BASIC6.04□□□□□ -1.44
P06344 Focad-201ENSMUST00000097992 5791 ntAPPRIS P2 TSL 5 BASIC6.04□□□□□ -1.44
P06344 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC6.04□□□□□ -1.44
P06344 Gm3139-203ENSMUST00000202642 2048 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
P06344 Trps1-204ENSMUST00000183757 6202 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
P06344 Pum2-216ENSMUST00000178015 5874 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
P06344 Olfr54-202ENSMUST00000215409 4782 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
P06344 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
P06344 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
P06344 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
P06344 9930111J21Rik2-201ENSMUST00000093152 2403 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
P06344 9930111J21Rik1-201ENSMUST00000093153 2403 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
P06344 Pcmtd2-202ENSMUST00000108754 3499 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
P06344 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
P06344 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 AC135119.1-204ENSMUST00000228036 2663 ntBASIC6.03□□□□□ -1.44
P06344 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 Gm5361-201ENSMUST00000211041 1498 ntBASIC6.03□□□□□ -1.44
P06344 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
P06344 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 Mphosph9-201ENSMUST00000031344 7747 ntAPPRIS P3 TSL 5 BASIC6.03□□□□□ -1.44
P06344 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 Gm28431-201ENSMUST00000185592 2166 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 Gm28681-201ENSMUST00000187387 2166 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 Ddx24-201ENSMUST00000044923 2850 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 Gm37877-201ENSMUST00000191630 2709 ntBASIC6.03□□□□□ -1.44
P06344 Gm25877-201ENSMUST00000104326 129 ntBASIC6.03□□□□□ -1.44
P06344 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 Gm5601-201ENSMUST00000118909 972 ntBASIC6.03□□□□□ -1.44
P06344 Apc-ps1-201ENSMUST00000119356 470 ntBASIC6.03□□□□□ -1.44
P06344 Gm14863-201ENSMUST00000119648 307 ntBASIC6.03□□□□□ -1.44
P06344 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC6.03□□□□□ -1.44
P06344 Gm11553-201ENSMUST00000120682 240 ntBASIC6.03□□□□□ -1.44
P06344 Prlr-204ENSMUST00000128450 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 Gm11364-201ENSMUST00000137593 297 ntTSL 5 BASIC6.03□□□□□ -1.44
P06344 Gm7613-201ENSMUST00000139070 487 ntBASIC6.03□□□□□ -1.44
P06344 Gm15564-201ENSMUST00000144134 545 ntTSL 3 BASIC6.03□□□□□ -1.44
P06344 Gm24682-201ENSMUST00000158764 137 ntBASIC6.03□□□□□ -1.44
P06344 Gm21970-201ENSMUST00000160764 884 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
P06344 Csn3-201ENSMUST00000001667 991 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 Gm23810-201ENSMUST00000175150 74 ntBASIC6.03□□□□□ -1.44
P06344 Gm7019-201ENSMUST00000194122 369 ntBASIC6.03□□□□□ -1.44
P06344 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC6.03□□□□□ -1.44
P06344 Gm30708-201ENSMUST00000202183 312 ntBASIC6.03□□□□□ -1.44
P06344 Gm18012-201ENSMUST00000204558 773 ntBASIC6.03□□□□□ -1.44
P06344 Gm20234-201ENSMUST00000214134 717 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 Gm36278-201ENSMUST00000217030 918 ntTSL 5 BASIC6.03□□□□□ -1.44
P06344 Gm18040-201ENSMUST00000217922 827 ntBASIC6.03□□□□□ -1.44
P06344 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC6.03□□□□□ -1.44
P06344 Gm2139-201ENSMUST00000222569 1075 ntBASIC6.03□□□□□ -1.44
P06344 AC139568.1-201ENSMUST00000222878 486 ntBASIC6.03□□□□□ -1.44
P06344 AC124489.3-201ENSMUST00000224037 278 ntBASIC6.03□□□□□ -1.44
P06344 CT009527.2-201ENSMUST00000225386 606 ntBASIC6.03□□□□□ -1.44
P06344 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.03□□□□□ -1.44
P06344 AC123917.1-201ENSMUST00000228063 1048 ntBASIC6.03□□□□□ -1.44
P06344 Vmn1r40-201ENSMUST00000075158 933 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
P06344 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 Gm10108-201ENSMUST00000078246 319 ntBASIC6.03□□□□□ -1.44
P06344 Olfr1510-201ENSMUST00000079459 1014 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
P06344 n-R5s95-201ENSMUST00000082684 118 ntBASIC6.03□□□□□ -1.44
P06344 Tbp-211ENSMUST00000162505 12794 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 Slc7a11-201ENSMUST00000029297 9223 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.03□□□□□ -1.44
P06344 Tcf24-201ENSMUST00000097824 2639 ntBASIC6.03□□□□□ -1.44
P06344 Prkg2-204ENSMUST00000162147 1389 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 Tti1-201ENSMUST00000029179 3830 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 Vmn2r4-202ENSMUST00000175724 2742 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
P06344 Vmn2r6-202ENSMUST00000176481 2742 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
P06344 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
P06344 Cep85l-201ENSMUST00000095691 2560 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
P06344 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC6.02□□□□□ -1.44
P06344 Aph1c-202ENSMUST00000169282 5205 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.44
P06344 Olfr150-202ENSMUST00000217257 1867 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
P06344 Pcdhb13-201ENSMUST00000056915 3710 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
P06344 Fam107a-203ENSMUST00000121887 3333 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
P06344 Gm37595-201ENSMUST00000192668 1742 ntBASIC6.02□□□□□ -1.45
P06344 Olfr802-203ENSMUST00000217576 5297 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
P06344 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.02□□□□□ -1.45
P06344 Adad1-201ENSMUST00000029274 1838 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms