Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Gm15239-201ENSMUST00000150690 603 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Gm8609-201ENSMUST00000182967 998 ntBASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Gm43576-201ENSMUST00000197937 871 ntBASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Gm8190-201ENSMUST00000199603 586 ntBASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Gm7463-201ENSMUST00000201541 547 ntBASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Zp4-ps-202ENSMUST00000222293 922 ntTSL 3 BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Mir425-201ENSMUST00000083645 85 ntBASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Gm4513-201ENSMUST00000207881 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Gm4565-201ENSMUST00000208134 1438 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Gm5431-203ENSMUST00000109212 3063 ntAPPRIS P1 TSL 5 BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Pm20d1-202ENSMUST00000112393 6900 ntAPPRIS P1 TSL 1 (best) BASIC8.08□□□□□ -1.12
Atg4aQ8C9S8 Dock2-201ENSMUST00000093193 6409 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Olfr802-202ENSMUST00000203785 5535 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gm43279-201ENSMUST00000202376 2512 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Sdcbp-202ENSMUST00000103008 2086 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Abcb11-202ENSMUST00000102710 4893 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Vcan-206ENSMUST00000159910 8332 ntTSL 5 BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gm44186-201ENSMUST00000204118 2752 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gdap1-201ENSMUST00000026879 3949 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gm43880-201ENSMUST00000203635 2162 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 C330024D21Rik-203ENSMUST00000202828 1714 ntTSL 5 BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Scn3a-201ENSMUST00000066432 9560 ntAPPRIS P1 TSL 5 BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Igkv3-5-201ENSMUST00000103400 382 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gm25344-201ENSMUST00000104503 132 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gm11498-201ENSMUST00000120660 949 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gm14300-201ENSMUST00000120800 946 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gm14847-201ENSMUST00000121978 519 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Mir1907-201ENSMUST00000122509 90 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gm35202-201ENSMUST00000130083 712 ntTSL 2 BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gm19480-201ENSMUST00000185547 667 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Scgb1b16-ps-201ENSMUST00000186029 275 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Scgb1b14-ps-201ENSMUST00000188286 275 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Scgb1b5-ps-201ENSMUST00000189491 280 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gm29605-201ENSMUST00000190800 292 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Cfhr2-202ENSMUST00000194186 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gm23011-202ENSMUST00000197855 275 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gm42443-201ENSMUST00000198084 1155 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gm42799-201ENSMUST00000201331 328 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Olfr258-ps1-202ENSMUST00000218625 1085 ntTSL 5 BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 AC154806.1-203ENSMUST00000227370 1032 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Il17f-201ENSMUST00000039046 1178 ntAPPRIS P1 TSL 1 (best) BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Olfr735-201ENSMUST00000049729 1065 ntAPPRIS P2 BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gm5341-201ENSMUST00000058881 489 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Pifo-202ENSMUST00000066319 899 ntAPPRIS ALT2 TSL 1 (best) BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gtsf1l-201ENSMUST00000094653 822 ntAPPRIS P1 BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Plch1-202ENSMUST00000059973 6241 ntAPPRIS ALT2 TSL 5 BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 AC153143.2-201ENSMUST00000220999 1804 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gm14896-201ENSMUST00000121311 1351 ntBASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gm20275-201ENSMUST00000215963 1387 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Sytl5-201ENSMUST00000067529 2301 ntAPPRIS P3 TSL 1 (best) BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gm26861-201ENSMUST00000180807 5278 ntTSL 5 BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Rabgap1-201ENSMUST00000061179 4967 ntAPPRIS P4 TSL 1 (best) BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Spag17os-202ENSMUST00000145279 3219 ntTSL 1 (best) BASIC8.07□□□□□ -1.12
Atg4aQ8C9S8 Gm136-201ENSMUST00000095129 1311 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Sytl2-207ENSMUST00000190837 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Ston2-201ENSMUST00000052969 9896 ntAPPRIS P2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm1965-202ENSMUST00000161362 2405 ntTSL 2 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Igkv5-43-201ENSMUST00000103368 379 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Trav8d-1-201ENSMUST00000103580 400 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm24790-201ENSMUST00000104285 132 ntBASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Sirpb1c-205ENSMUST00000108354 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm6987-201ENSMUST00000119319 428 ntBASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Apc-ps1-201ENSMUST00000119356 470 ntBASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm11198-201ENSMUST00000119771 974 ntBASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm5809-201ENSMUST00000121854 529 ntBASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Selenok-ps1-201ENSMUST00000125204 785 ntBASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm14457-201ENSMUST00000148069 1161 ntBASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm10364-202ENSMUST00000153034 1001 ntBASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm15734-201ENSMUST00000163076 1040 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Vmn1r29-201ENSMUST00000168416 1023 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm5871-201ENSMUST00000176461 718 ntBASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Rpl9-ps1-202ENSMUST00000182502 576 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm9274-201ENSMUST00000182505 984 ntBASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm4856-201ENSMUST00000192696 1091 ntBASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm37380-201ENSMUST00000193752 397 ntBASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 1700094M23Rik-201ENSMUST00000197695 695 ntTSL 5 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm43241-201ENSMUST00000198375 364 ntTSL 3 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Fxyd4-204ENSMUST00000203433 670 ntTSL 3 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm44896-201ENSMUST00000206190 772 ntBASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Olfr1449-202ENSMUST00000208624 1296 ntAPPRIS P1 TSL 3 BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Gm45693-201ENSMUST00000211391 1157 ntBASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Dynlrb2-202ENSMUST00000213007 527 ntTSL 1 (best) BASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 AC115793.1-201ENSMUST00000216605 215 ntBASIC8.06□□□□□ -1.12
Atg4aQ8C9S8 Ear14-202ENSMUST00000228064 948 ntAPPRIS P1 BASIC8.06□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms