Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 CT025566.1-202ENSMUST00000224800 2511 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gm37364-201ENSMUST00000192533 3920 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Cd244-201ENSMUST00000004829 3760 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Vmn2r40-201ENSMUST00000171942 3623 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 AC152922.2-201ENSMUST00000213353 3879 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Zfp638-203ENSMUST00000113836 4366 ntAPPRIS ALT2 TSL 5 BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Gfpt1-204ENSMUST00000113658 6238 ntAPPRIS P1 TSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Vmn1r44-206ENSMUST00000226760 2070 ntAPPRIS P1 BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 AC129308.1-201ENSMUST00000223800 2309 ntBASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Slc26a2-201ENSMUST00000037603 2802 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Olfr381-204ENSMUST00000215358 2658 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 4930565N06Rik-201ENSMUST00000153572 2416 ntTSL 1 (best) BASIC6.09□□□□□ -1.43
Col6a6Q8C6K9 Tpm3-rs2-201ENSMUST00000116350 323 ntBASIC6.09□□□□□ -1.44
Col6a6Q8C6K9 Gm14529-201ENSMUST00000117894 406 ntBASIC6.09□□□□□ -1.44
Col6a6Q8C6K9 Gm6977-201ENSMUST00000121568 512 ntBASIC6.09□□□□□ -1.44
Col6a6Q8C6K9 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC6.09□□□□□ -1.44
Col6a6Q8C6K9 Gm15956-201ENSMUST00000153352 502 ntTSL 2 BASIC6.09□□□□□ -1.44
Col6a6Q8C6K9 Gm25445-201ENSMUST00000158996 299 ntBASIC6.09□□□□□ -1.44
Col6a6Q8C6K9 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC6.09□□□□□ -1.44
Col6a6Q8C6K9 1700124L16Rik-202ENSMUST00000189308 546 ntTSL 5 BASIC6.09□□□□□ -1.44
Col6a6Q8C6K9 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.09□□□□□ -1.44
Col6a6Q8C6K9 Mir6906-201ENSMUST00000198998 58 ntBASIC6.09□□□□□ -1.44
Col6a6Q8C6K9 Gm38584-201ENSMUST00000207361 517 ntTSL 5 BASIC6.09□□□□□ -1.44
Col6a6Q8C6K9 Gm45734-201ENSMUST00000211916 411 ntBASIC6.09□□□□□ -1.44
Col6a6Q8C6K9 CT009738.1-201ENSMUST00000219031 809 ntBASIC6.09□□□□□ -1.44
Col6a6Q8C6K9 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC6.09□□□□□ -1.44
Col6a6Q8C6K9 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC6.09□□□□□ -1.44
Col6a6Q8C6K9 AC140393.3-201ENSMUST00000228396 1352 ntBASIC6.09□□□□□ -1.44
Col6a6Q8C6K9 Bmx-201ENSMUST00000112263 2433 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Aldh1l2-201ENSMUST00000020497 6027 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Cfap44-201ENSMUST00000099742 6583 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 9630028H03Rik-201ENSMUST00000129868 2364 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Olfr1384-202ENSMUST00000213776 4437 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Acpp-201ENSMUST00000062723 4483 ntAPPRIS P3 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Trip12-201ENSMUST00000027421 9632 ntAPPRIS P2 TSL 5 BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Smc5-201ENSMUST00000087556 5683 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Gm26067-201ENSMUST00000103789 110 ntBASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Gm12901-201ENSMUST00000118690 532 ntBASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Gm27005-201ENSMUST00000182783 921 ntBASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Gm37705-201ENSMUST00000195111 577 ntTSL 5 BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Gm44787-202ENSMUST00000208339 1069 ntTSL 5 BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Fam126b-202ENSMUST00000097724 4581 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Gm11853-201ENSMUST00000119687 1384 ntBASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Dnajb4-202ENSMUST00000050073 2464 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 AC165260.6-206ENSMUST00000223884 3698 ntBASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Gm42397-201ENSMUST00000207472 2002 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Zbtb6-201ENSMUST00000053098 4535 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Gm9049-201ENSMUST00000178998 2409 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Gm32717-201ENSMUST00000219147 2409 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Gm32802-201ENSMUST00000219565 2409 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Cpb1-201ENSMUST00000011607 2718 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 4930431P03Rik-204ENSMUST00000228169 1967 ntBASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Gm8177-201ENSMUST00000181591 1336 ntBASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 4921517D22Rik-201ENSMUST00000061597 3149 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Olfr1055-203ENSMUST00000213564 1444 ntAPPRIS P1 TSL 5 BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Uba1y-202ENSMUST00000190013 3441 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 AC111010.1-203ENSMUST00000227287 1548 ntBASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Rassf6-206ENSMUST00000202784 1919 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Chm-202ENSMUST00000113388 4749 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Dnajc18-201ENSMUST00000025208 5169 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Vgll1-202ENSMUST00000114745 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Gm15122-201ENSMUST00000135434 462 ntTSL 2 BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Gm20491-201ENSMUST00000173765 1241 ntBASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Gm3351-201ENSMUST00000193454 505 ntBASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Gm37349-201ENSMUST00000194205 624 ntBASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Gm43120-201ENSMUST00000196228 667 ntTSL 3 BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 AC112956.1-201ENSMUST00000213563 492 ntBASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 AC126685.1-201ENSMUST00000221001 121 ntBASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 Mlip-201ENSMUST00000034910 1227 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 4931423N10Rik-202ENSMUST00000114505 1392 ntTSL 5 BASIC6.08□□□□□ -1.44
Col6a6Q8C6K9 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm29670-201ENSMUST00000190228 2491 ntBASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm26656-201ENSMUST00000181825 2972 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Ptrhd1-201ENSMUST00000179139 3840 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Cep85-202ENSMUST00000121566 3748 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Olfr1362-201ENSMUST00000051874 3045 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm20752-201ENSMUST00000197341 2833 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 2810021J22Rik-201ENSMUST00000073924 3866 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm20749-201ENSMUST00000186319 3492 ntBASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 AC138221.1-201ENSMUST00000216180 4944 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Ablim1-201ENSMUST00000079360 7152 ntAPPRIS P3 TSL 5 BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Srl-202ENSMUST00000090500 3698 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 AC158986.1-201ENSMUST00000228391 3455 ntBASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Xlr5a-203ENSMUST00000114521 1474 ntTSL 5 BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Igsf1-201ENSMUST00000033442 4421 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Igkv16-104-201ENSMUST00000103323 378 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm15801-201ENSMUST00000120920 522 ntBASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm23884-201ENSMUST00000122687 294 ntBASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Nudt12os-202ENSMUST00000152750 849 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
Col6a6Q8C6K9 Gm8783-201ENSMUST00000159764 522 ntBASIC6.07□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 101.9 ms