Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 March1-204ENSMUST00000110253 2748 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
Upf3bQ3ULL6 A430110C17Rik-201ENSMUST00000195666 4348 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Magea5-202ENSMUST00000169540 1563 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Kars-ps1-201ENSMUST00000122077 1767 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Gm43707-201ENSMUST00000196451 3187 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Cfap54-211ENSMUST00000212902 9516 ntAPPRIS P5 TSL 1 (best) BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Mir708-201ENSMUST00000102189 109 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Gstm6-203ENSMUST00000106683 745 ntTSL 3 BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Gm13877-201ENSMUST00000120614 417 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Gm8215-201ENSMUST00000120627 990 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Gm14796-201ENSMUST00000121216 959 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 4930517O19Rik-201ENSMUST00000140320 603 ntTSL 5 BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Gm25281-201ENSMUST00000157270 104 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Gm20641-201ENSMUST00000176069 615 ntTSL 3 BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Gm25617-201ENSMUST00000179548 133 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Gm27156-201ENSMUST00000184589 754 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Mir7058-201ENSMUST00000184637 75 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 2310046K23Rik-201ENSMUST00000193521 677 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Gm22711-202ENSMUST00000197029 135 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Gm25617-202ENSMUST00000198387 132 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 AC079680.1-202ENSMUST00000219835 654 ntTSL 5 BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 AC091237.1-201ENSMUST00000224911 637 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 AC151730.1-201ENSMUST00000226106 448 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Olfr960-201ENSMUST00000077060 1067 ntAPPRIS P2 BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Gm24621-201ENSMUST00000082679 140 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Gm5084-202ENSMUST00000224064 3609 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Csnk1g1-213ENSMUST00000206528 1740 ntTSL 5 BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Olfr1247-203ENSMUST00000216424 2164 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 C130089K02Rik-201ENSMUST00000194534 6960 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Olfr11-202ENSMUST00000205631 3265 ntAPPRIS P1 TSL 3 BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 AC135119.1-204ENSMUST00000228036 2663 ntBASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Mtpap-201ENSMUST00000025077 2651 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 C030029H02Rik-202ENSMUST00000210356 2980 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Upf3bQ3ULL6 Tshr-204ENSMUST00000221216 1638 ntTSL 5 BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Sspo-201ENSMUST00000043676 15148 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Adar-201ENSMUST00000029563 3753 ntAPPRIS P4 TSL 1 (best) BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Krt222-202ENSMUST00000103132 3072 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Abca6-201ENSMUST00000044003 5240 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Zfand4-201ENSMUST00000036503 3123 ntAPPRIS P5 TSL 5 BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Vmn1r181-204ENSMUST00000227637 4587 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Gm37863-201ENSMUST00000194911 1457 ntBASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Gm24048-201ENSMUST00000102411 106 ntBASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Snord88a-201ENSMUST00000116723 90 ntBASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Gm5319-201ENSMUST00000118965 873 ntBASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Gm12447-201ENSMUST00000119110 470 ntBASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Gm6987-201ENSMUST00000119319 428 ntBASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Gm15311-201ENSMUST00000119682 282 ntBASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Gm15305-201ENSMUST00000120354 288 ntBASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Mpped2-201ENSMUST00000016530 1217 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Gm20615-201ENSMUST00000177503 705 ntBASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Platr5-202ENSMUST00000181016 479 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Dap-202ENSMUST00000185618 388 ntTSL 3 BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Gm34342-201ENSMUST00000192139 335 ntTSL 3 BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 CT030657.2-201ENSMUST00000220710 792 ntTSL 5 BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 AC165260.3-201ENSMUST00000225101 665 ntBASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 AC156016.2-201ENSMUST00000228200 525 ntBASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Olfr299-201ENSMUST00000057734 993 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Olfr66-201ENSMUST00000079117 936 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Olfr461-201ENSMUST00000089490 942 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Hrasls-201ENSMUST00000089824 2916 ntAPPRIS P1 TSL 1 (best) BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Vmn1r9-203ENSMUST00000228714 4573 ntAPPRIS P1 BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Itih4-201ENSMUST00000006703 2980 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Itih4-202ENSMUST00000078490 2993 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Nrg1-203ENSMUST00000207470 5415 ntAPPRIS ALT2 TSL 1 (best) BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Lctl-202ENSMUST00000118215 1380 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 Gm9573-201ENSMUST00000164502 5231 ntAPPRIS P1 TSL 5 BASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 AC129085.2-201ENSMUST00000223763 2800 ntBASIC7.19□□□□□ -1.26
Upf3bQ3ULL6 CT030185.1-201ENSMUST00000222940 2289 ntBASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Aass-201ENSMUST00000031707 3701 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Agl-203ENSMUST00000159742 4344 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Cfap74-203ENSMUST00000105619 2364 ntAPPRIS ALT2 TSL 2 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Ptprd-220ENSMUST00000174831 4518 ntTSL 5 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Eif3e-201ENSMUST00000022960 1506 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Upf3bQ3ULL6 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms