Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Faddos-201ENSMUST00000097928 1053 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H3f3aP84244 CT010453.1-201ENSMUST00000226795 2201 ntBASIC6.04□□□□□ -1.44
H3f3aP84244 Atp13a5-201ENSMUST00000075806 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
H3f3aP84244 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
H3f3aP84244 Nol8-203ENSMUST00000221142 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
H3f3aP84244 Ctnna2-206ENSMUST00000162273 3277 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H3f3aP84244 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.04□□□□□ -1.44
H3f3aP84244 5830416I19Rik-201ENSMUST00000198687 2627 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
H3f3aP84244 Gm43029-201ENSMUST00000201829 1535 ntBASIC6.04□□□□□ -1.44
H3f3aP84244 Trappc13-206ENSMUST00000179891 1689 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
H3f3aP84244 Sbf2-208ENSMUST00000166020 5481 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
H3f3aP84244 Olfr1033-203ENSMUST00000214546 2257 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
H3f3aP84244 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.04□□□□□ -1.44
H3f3aP84244 Gm43113-201ENSMUST00000199713 1754 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 Gm42478-201ENSMUST00000199252 1467 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 Gm31049-201ENSMUST00000201516 1302 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3f3aP84244 Gm43876-201ENSMUST00000203831 3229 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 Gm10440-201ENSMUST00000197424 2753 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3f3aP84244 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
H3f3aP84244 Birc6-223ENSMUST00000183224 14562 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
H3f3aP84244 Cyp2c67-201ENSMUST00000067328 1732 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
H3f3aP84244 Vmn1r71-203ENSMUST00000227003 5048 ntAPPRIS P2 BASIC6.03□□□□□ -1.44
H3f3aP84244 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3f3aP84244 Gm38381-201ENSMUST00000193594 2275 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
H3f3aP84244 Trbv29-201ENSMUST00000103281 353 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
H3f3aP84244 Snord88a-201ENSMUST00000116723 90 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 Gm6142-201ENSMUST00000120290 325 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 Gm13877-201ENSMUST00000120614 417 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 Gm14796-201ENSMUST00000121216 959 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 Gm12181-201ENSMUST00000121448 531 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 Gm14612-201ENSMUST00000121522 881 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.03□□□□□ -1.44
H3f3aP84244 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3f3aP84244 Airn-202ENSMUST00000159731 435 ntTSL 3 BASIC6.03□□□□□ -1.44
H3f3aP84244 Sh3bgr-207ENSMUST00000171181 678 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
H3f3aP84244 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3f3aP84244 Trav21-dv12-201ENSMUST00000180938 360 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
H3f3aP84244 4930568A12Rik-202ENSMUST00000188292 926 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3f3aP84244 4930533L02Rik-201ENSMUST00000194425 1160 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 Gm45122-201ENSMUST00000206376 784 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 Gm31812-201ENSMUST00000210323 1170 ntTSL 3 BASIC6.03□□□□□ -1.44
H3f3aP84244 AC172194.1-201ENSMUST00000214246 1020 ntTSL 5 BASIC6.03□□□□□ -1.44
H3f3aP84244 Gm46203-201ENSMUST00000218130 478 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 AC154558.1-201ENSMUST00000222278 415 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 Gm7252-201ENSMUST00000223284 456 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 CT009495.1-201ENSMUST00000224221 862 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 AC132833.4-201ENSMUST00000228313 203 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 Lalba-201ENSMUST00000023726 771 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
H3f3aP84244 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
H3f3aP84244 Gm37914-201ENSMUST00000195317 2679 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 Ank3-240ENSMUST00000183169 6870 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
H3f3aP84244 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
H3f3aP84244 C87436-201ENSMUST00000050497 2534 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
H3f3aP84244 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
H3f3aP84244 Olfr266-203ENSMUST00000216610 1520 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
H3f3aP84244 Mrpl48-208ENSMUST00000150042 4285 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
H3f3aP84244 Gm44441-201ENSMUST00000203642 2475 ntBASIC6.03□□□□□ -1.44
H3f3aP84244 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.03□□□□□ -1.44
H3f3aP84244 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
H3f3aP84244 Cyld-202ENSMUST00000098519 7954 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
H3f3aP84244 Gm37863-201ENSMUST00000194911 1457 ntBASIC6.02□□□□□ -1.44
H3f3aP84244 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.02□□□□□ -1.45
H3f3aP84244 Mapk10-205ENSMUST00000128869 2518 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
H3f3aP84244 Zc3h11a-204ENSMUST00000191896 4396 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
H3f3aP84244 Clca4a-201ENSMUST00000029923 3004 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
H3f3aP84244 Csnk1g1-201ENSMUST00000034949 7208 ntAPPRIS P2 TSL 1 (best) BASIC6.02□□□□□ -1.45
H3f3aP84244 Vmn1r8-202ENSMUST00000227706 1563 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
H3f3aP84244 Gm43483-201ENSMUST00000196724 2860 ntBASIC6.02□□□□□ -1.45
H3f3aP84244 AC124516.2-201ENSMUST00000221455 1829 ntBASIC6.02□□□□□ -1.45
H3f3aP84244 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
H3f3aP84244 Bglap3-202ENSMUST00000107542 2051 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
H3f3aP84244 Gm16523-202ENSMUST00000203640 4750 ntBASIC6.02□□□□□ -1.45
H3f3aP84244 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
H3f3aP84244 Ankrd17-205ENSMUST00000197021 8067 ntAPPRIS ALT2 TSL 5 BASIC6.02□□□□□ -1.45
H3f3aP84244 Cd44-201ENSMUST00000005218 5614 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
H3f3aP84244 Igkv8-24-201ENSMUST00000103384 365 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
H3f3aP84244 Rps12-ps10-201ENSMUST00000117447 399 ntBASIC6.02□□□□□ -1.45
H3f3aP84244 Smim24-202ENSMUST00000118206 949 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
H3f3aP84244 Olfr1063-ps1-201ENSMUST00000118807 942 ntBASIC6.02□□□□□ -1.45
H3f3aP84244 Gm12447-201ENSMUST00000119110 470 ntBASIC6.02□□□□□ -1.45
H3f3aP84244 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
H3f3aP84244 Gm23810-201ENSMUST00000175150 74 ntBASIC6.02□□□□□ -1.45
H3f3aP84244 Gm5930-202ENSMUST00000178002 489 ntTSL 5 BASIC6.02□□□□□ -1.45
H3f3aP84244 Gm27507-201ENSMUST00000184199 93 ntBASIC6.02□□□□□ -1.45
H3f3aP84244 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
H3f3aP84244 Gm43089-201ENSMUST00000199162 275 ntBASIC6.02□□□□□ -1.45
H3f3aP84244 Gm43599-201ENSMUST00000202680 528 ntTSL 2 BASIC6.02□□□□□ -1.45
H3f3aP84244 Gm44411-201ENSMUST00000204172 349 ntBASIC6.02□□□□□ -1.45
H3f3aP84244 Olfr451-ps1-201ENSMUST00000205127 936 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
H3f3aP84244 Gm39463-201ENSMUST00000214575 735 ntTSL 3 BASIC6.02□□□□□ -1.45
H3f3aP84244 AL929555.1-201ENSMUST00000215283 509 ntBASIC6.02□□□□□ -1.45
H3f3aP84244 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.02□□□□□ -1.45
H3f3aP84244 AC135292.2-201ENSMUST00000227559 367 ntBASIC6.02□□□□□ -1.45
H3f3aP84244 Olfr109-201ENSMUST00000031086 945 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
H3f3aP84244 Gm9985-201ENSMUST00000044101 510 ntBASIC6.02□□□□□ -1.45
H3f3aP84244 Gm9961-201ENSMUST00000068397 547 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
H3f3aP84244 Cldn34b2-201ENSMUST00000076671 1077 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
Retrieved 100 of 76,532 protein–RNA pairs in 56.4 ms