Protein–RNA interactions for Protein: P53784

Sox3, Transcription factor SOX-3, mousemouse

Predictions only

Length 375 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox3P53784 Gm37556-201ENSMUST00000193877 468 ntTSL 5 BASIC6.56□□□□□ -1.36
Sox3P53784 1700015C17Rik-201ENSMUST00000197297 239 ntTSL 5 BASIC6.56□□□□□ -1.36
Sox3P53784 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sox3P53784 Gpr19-210ENSMUST00000203762 498 ntTSL 3 BASIC6.56□□□□□ -1.36
Sox3P53784 Gm4083-201ENSMUST00000207158 451 ntBASIC6.56□□□□□ -1.36
Sox3P53784 Gm34474-201ENSMUST00000209645 356 ntTSL 5 BASIC6.56□□□□□ -1.36
Sox3P53784 AC150661.1-201ENSMUST00000222563 495 ntBASIC6.56□□□□□ -1.36
Sox3P53784 AC124395.1-201ENSMUST00000225940 707 ntBASIC6.56□□□□□ -1.36
Sox3P53784 AC102139.1-201ENSMUST00000227000 251 ntBASIC6.56□□□□□ -1.36
Sox3P53784 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sox3P53784 Uqcrh-201ENSMUST00000050580 402 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sox3P53784 Ndufa9-201ENSMUST00000088194 1238 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Sox3P53784 Col6a6-201ENSMUST00000060896 3954 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sox3P53784 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
Sox3P53784 Gm35850-201ENSMUST00000210956 4653 ntTSL 5 BASIC6.56□□□□□ -1.36
Sox3P53784 Gja10-201ENSMUST00000056517 2117 ntAPPRIS P2 BASIC6.56□□□□□ -1.36
Sox3P53784 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC6.56□□□□□ -1.36
Sox3P53784 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.56□□□□□ -1.36
Sox3P53784 Clasp1-203ENSMUST00000165223 7207 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
Sox3P53784 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sox3P53784 Gm12346-201ENSMUST00000121455 2255 ntBASIC6.56□□□□□ -1.36
Sox3P53784 Clec7a-204ENSMUST00000195589 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sox3P53784 Cyp2b19-201ENSMUST00000077855 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
Sox3P53784 Bnip3l-201ENSMUST00000022634 3238 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.55□□□□□ -1.36
Sox3P53784 Gm18726-201ENSMUST00000218175 2010 ntBASIC6.55□□□□□ -1.36
Sox3P53784 Olfr1275-203ENSMUST00000217539 1661 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Sox3P53784 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Vmn1r58-204ENSMUST00000228728 9991 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Sox3P53784 Cd59a-203ENSMUST00000168176 1806 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
Sox3P53784 CT009604.1-201ENSMUST00000223900 1328 ntBASIC6.55□□□□□ -1.36
Sox3P53784 Sorbs2os-201ENSMUST00000135116 2474 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Rsad2-201ENSMUST00000020970 3782 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Ranbp6-201ENSMUST00000099525 4575 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Sox3P53784 Gm42996-201ENSMUST00000196116 1636 ntBASIC6.55□□□□□ -1.36
Sox3P53784 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Gm13772-201ENSMUST00000118431 317 ntBASIC6.55□□□□□ -1.36
Sox3P53784 Gm14787-201ENSMUST00000121236 388 ntBASIC6.55□□□□□ -1.36
Sox3P53784 Gm25178-201ENSMUST00000122633 325 ntBASIC6.55□□□□□ -1.36
Sox3P53784 Gm13480-201ENSMUST00000125095 1000 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Gm16336-201ENSMUST00000126011 380 ntTSL 2 BASIC6.55□□□□□ -1.36
Sox3P53784 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC6.55□□□□□ -1.36
Sox3P53784 Gm23945-201ENSMUST00000179609 92 ntBASIC6.55□□□□□ -1.36
Sox3P53784 Gm26729-201ENSMUST00000180744 352 ntBASIC6.55□□□□□ -1.36
Sox3P53784 Gm26528-201ENSMUST00000181965 283 ntBASIC6.55□□□□□ -1.36
Sox3P53784 Gm35108-201ENSMUST00000194321 699 ntBASIC6.55□□□□□ -1.36
Sox3P53784 Gm33191-201ENSMUST00000195604 699 ntBASIC6.55□□□□□ -1.36
Sox3P53784 Trav7-1-201ENSMUST00000198019 337 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Sox3P53784 Gm44221-201ENSMUST00000203552 388 ntBASIC6.55□□□□□ -1.36
Sox3P53784 Gm45734-201ENSMUST00000211916 411 ntBASIC6.55□□□□□ -1.36
Sox3P53784 D730003K21Rik-202ENSMUST00000217456 533 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC6.55□□□□□ -1.36
Sox3P53784 Pla2g12a-202ENSMUST00000061165 476 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Scimp-201ENSMUST00000074572 617 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Olfr933-201ENSMUST00000075680 1003 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
Sox3P53784 Sorbs2-202ENSMUST00000067107 5597 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Ccr2-203ENSMUST00000168841 5728 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Slco1c1-201ENSMUST00000032362 3178 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Gm37535-201ENSMUST00000194442 2365 ntBASIC6.55□□□□□ -1.36
Sox3P53784 Trip12-206ENSMUST00000186465 9590 ntAPPRIS P2 TSL 5 BASIC6.55□□□□□ -1.36
Sox3P53784 Zdhhc9-202ENSMUST00000088935 2815 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Dsg1c-201ENSMUST00000054128 4088 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Bank1-201ENSMUST00000041577 3268 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 AC163660.4-201ENSMUST00000224983 2171 ntBASIC6.55□□□□□ -1.36
Sox3P53784 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Lifr-207ENSMUST00000227727 2489 ntAPPRIS ALT2 BASIC6.55□□□□□ -1.36
Sox3P53784 Ccdc175-201ENSMUST00000021494 2622 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Sox3P53784 Plch1-206ENSMUST00000159676 6560 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.55□□□□□ -1.36
Sox3P53784 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC6.55□□□□□ -1.36
Sox3P53784 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Stra6l-201ENSMUST00000030011 3606 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Mapk10-201ENSMUST00000086854 6630 ntAPPRIS ALT1 TSL 1 (best) BASIC6.55□□□□□ -1.36
Sox3P53784 Psg21-202ENSMUST00000182128 2066 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
Sox3P53784 Psg21-201ENSMUST00000094793 2074 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sox3P53784 Trim12a-203ENSMUST00000106839 1486 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sox3P53784 Dcx-201ENSMUST00000033642 9074 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sox3P53784 Gm44231-201ENSMUST00000204106 4075 ntBASIC6.54□□□□□ -1.36
Sox3P53784 Ampd1-201ENSMUST00000090715 2342 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sox3P53784 Tcf7l2-209ENSMUST00000111656 3629 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sox3P53784 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.54□□□□□ -1.36
Sox3P53784 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.54□□□□□ -1.36
Sox3P53784 Nudt12-201ENSMUST00000025065 4113 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sox3P53784 Gm45528-201ENSMUST00000209854 3145 ntBASIC6.54□□□□□ -1.36
Sox3P53784 Fgf1-201ENSMUST00000040647 3981 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sox3P53784 Traj18-201ENSMUST00000103723 66 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
Sox3P53784 n-R5s72-201ENSMUST00000104518 119 ntBASIC6.54□□□□□ -1.36
Sox3P53784 Cd209d-201ENSMUST00000011445 919 ntAPPRIS P2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sox3P53784 Gm13141-201ENSMUST00000117417 456 ntBASIC6.54□□□□□ -1.36
Sox3P53784 Fthl17-ps3-201ENSMUST00000126259 513 ntBASIC6.54□□□□□ -1.36
Sox3P53784 4931428L18Rik-201ENSMUST00000127775 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
Sox3P53784 Gm23756-201ENSMUST00000157582 114 ntBASIC6.54□□□□□ -1.36
Sox3P53784 Gm6428-201ENSMUST00000161062 345 ntBASIC6.54□□□□□ -1.36
Sox3P53784 Gm27998-201ENSMUST00000184902 361 ntBASIC6.54□□□□□ -1.36
Sox3P53784 Gm36935-201ENSMUST00000192526 292 ntBASIC6.54□□□□□ -1.36
Sox3P53784 Gm36939-201ENSMUST00000194889 439 ntBASIC6.54□□□□□ -1.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms