Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Gm23225-201ENSMUST00000158121 114 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Gm6918-201ENSMUST00000167622 1222 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Gm17198-201ENSMUST00000171792 1154 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Gm8895-201ENSMUST00000172300 1223 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Rps16-ps3-201ENSMUST00000179126 441 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Gm28228-201ENSMUST00000186880 632 ntTSL 5 BASIC8.11□□□□□ -1.11
Col4a1P02463 AC166105.1-201ENSMUST00000227512 482 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Vmn1r41-205ENSMUST00000227630 827 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 AC116591.1-201ENSMUST00000227919 351 ntBASIC8.11□□□□□ -1.11
Col4a1P02463 Lcn9-201ENSMUST00000023978 839 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 Vmn1r11-201ENSMUST00000071304 900 ntAPPRIS P2 BASIC8.11□□□□□ -1.11
Col4a1P02463 4921524L21Rik-201ENSMUST00000044829 1480 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 Klra1-201ENSMUST00000032288 1668 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Col4a1P02463 Zfp518b-201ENSMUST00000057258 6804 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Col4a1P02463 Wnk1-218ENSMUST00000161512 1426 ntBASIC8.1□□□□□ -1.11
Col4a1P02463 Ctnnd1-217ENSMUST00000111691 5380 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a1P02463 AW554918-208ENSMUST00000165400 5351 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Col4a1P02463 AW554918-202ENSMUST00000097643 5351 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Col4a1P02463 C3ar1-201ENSMUST00000042081 4305 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a1P02463 Olfr691-202ENSMUST00000213290 2327 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Col4a1P02463 A330032B11Rik-201ENSMUST00000180609 1919 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a1P02463 AC135119.1-204ENSMUST00000228036 2663 ntBASIC8.1□□□□□ -1.11
Col4a1P02463 Slmap-204ENSMUST00000112330 3962 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Col4a1P02463 Frs2-201ENSMUST00000020381 6420 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a1P02463 Gm37457-201ENSMUST00000193639 2433 ntBASIC8.1□□□□□ -1.11
Col4a1P02463 Nav2-202ENSMUST00000064395 11317 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Col4a1P02463 Gm24888-201ENSMUST00000104387 130 ntBASIC8.1□□□□□ -1.11
Col4a1P02463 Mir466j-201ENSMUST00000116876 122 ntBASIC8.1□□□□□ -1.11
Col4a1P02463 Gm11622-201ENSMUST00000120525 691 ntBASIC8.1□□□□□ -1.11
Col4a1P02463 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC8.1□□□□□ -1.11
Col4a1P02463 Fam229b-202ENSMUST00000124941 721 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a1P02463 Gm15527-202ENSMUST00000144094 770 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a1P02463 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a1P02463 Gm8837-201ENSMUST00000161037 1107 ntBASIC8.1□□□□□ -1.11
Col4a1P02463 D630011A20Rik-201ENSMUST00000180858 500 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a1P02463 Gm27240-201ENSMUST00000183616 677 ntTSL 3 BASIC8.1□□□□□ -1.11
Col4a1P02463 Mir7211-201ENSMUST00000184071 63 ntBASIC8.1□□□□□ -1.11
Col4a1P02463 Gm44833-201ENSMUST00000208368 331 ntBASIC8.1□□□□□ -1.11
Col4a1P02463 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC8.1□□□□□ -1.11
Col4a1P02463 Gm34829-202ENSMUST00000216017 1131 ntTSL 5 BASIC8.1□□□□□ -1.11
Col4a1P02463 Mrpl42-203ENSMUST00000218893 661 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a1P02463 AC154634.2-201ENSMUST00000225983 1184 ntBASIC8.1□□□□□ -1.11
Col4a1P02463 Gm22053-201ENSMUST00000083394 200 ntBASIC8.1□□□□□ -1.11
Col4a1P02463 Mtus1-201ENSMUST00000051379 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a1P02463 Vmn2r14-201ENSMUST00000170341 2547 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Col4a1P02463 Gm10826-201ENSMUST00000215366 3304 ntBASIC8.1□□□□□ -1.11
Col4a1P02463 Gm38811-201ENSMUST00000203781 3478 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a1P02463 Wfdc8-203ENSMUST00000109339 3227 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a1P02463 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC8.1□□□□□ -1.11
Col4a1P02463 Tmc3-201ENSMUST00000039317 6221 ntAPPRIS P2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 Smad5-202ENSMUST00000109874 4534 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 Astn1-201ENSMUST00000046110 7195 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 Wdfy3-205ENSMUST00000174598 10581 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Col4a1P02463 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 Gm18796-201ENSMUST00000190440 1767 ntBASIC8.09□□□□□ -1.11
Col4a1P02463 Hectd4-201ENSMUST00000042614 15482 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Col4a1P02463 Grik1-210ENSMUST00000228034 2708 ntBASIC8.09□□□□□ -1.11
Col4a1P02463 Vmn1r181-202ENSMUST00000226843 4496 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Col4a1P02463 4933416M07Rik-201ENSMUST00000181424 624 ntTSL 5 BASIC8.09□□□□□ -1.11
Col4a1P02463 Gm9274-201ENSMUST00000182505 984 ntBASIC8.09□□□□□ -1.11
Col4a1P02463 Scgb1b4-ps-201ENSMUST00000186920 271 ntBASIC8.09□□□□□ -1.11
Col4a1P02463 Gm37376-201ENSMUST00000192176 453 ntBASIC8.09□□□□□ -1.11
Col4a1P02463 Gm43235-201ENSMUST00000200121 297 ntBASIC8.09□□□□□ -1.11
Col4a1P02463 Gm44221-201ENSMUST00000203552 388 ntBASIC8.09□□□□□ -1.11
Col4a1P02463 1700093K21Rik-201ENSMUST00000020527 1030 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 Cx3cl1-205ENSMUST00000211947 377 ntTSL 5 BASIC8.09□□□□□ -1.11
Col4a1P02463 Gm18405-201ENSMUST00000220743 511 ntBASIC8.09□□□□□ -1.11
Col4a1P02463 Olfr1337-201ENSMUST00000077247 951 ntAPPRIS P1 BASIC8.09□□□□□ -1.11
Col4a1P02463 Gm8526-201ENSMUST00000079153 475 ntBASIC8.09□□□□□ -1.11
Col4a1P02463 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 Nphp3-207ENSMUST00000194774 4722 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 Ap3s2-201ENSMUST00000075657 5813 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 Olfr118-202ENSMUST00000215811 1742 ntAPPRIS P1 TSL 5 BASIC8.09□□□□□ -1.11
Col4a1P02463 Zbtb38-201ENSMUST00000093798 4091 ntAPPRIS P1 TSL 2 BASIC8.09□□□□□ -1.11
Col4a1P02463 Gm13769-202ENSMUST00000214797 2340 ntAPPRIS P1 TSL 3 BASIC8.09□□□□□ -1.11
Col4a1P02463 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 Sbno1-216ENSMUST00000199808 10161 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 Cmtr2-201ENSMUST00000056972 3545 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 Hivep2-204ENSMUST00000187083 9268 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 Gm26981-201ENSMUST00000182453 3169 ntTSL 5 BASIC8.09□□□□□ -1.11
Col4a1P02463 Gm30698-201ENSMUST00000214789 3198 ntBASIC8.09□□□□□ -1.11
Col4a1P02463 Kirrel3os-201ENSMUST00000066604 3799 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 Cacna1d-201ENSMUST00000112249 8068 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 Fam168a-202ENSMUST00000107042 6388 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 4933406C10Rik-202ENSMUST00000181670 1633 ntTSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 Asph-211ENSMUST00000108339 6453 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 Usp37-205ENSMUST00000189257 4974 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.11
Col4a1P02463 Kcnj6-203ENSMUST00000165538 3637 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Col4a1P02463 Gm28109-201ENSMUST00000189979 2167 ntTSL 1 (best) BASIC8.09□□□□□ -1.12
Col4a1P02463 Gm43719-201ENSMUST00000200088 2199 ntBASIC8.09□□□□□ -1.12
Col4a1P02463 Rhoh-201ENSMUST00000031106 5093 ntAPPRIS P1 TSL 1 (best) BASIC8.09□□□□□ -1.12
Col4a1P02463 Ank3-210ENSMUST00000182155 6375 ntAPPRIS ALT2 TSL 1 (best) BASIC8.09□□□□□ -1.12
Col4a1P02463 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC8.09□□□□□ -1.12
Col4a1P02463 Gm15880-201ENSMUST00000142678 2884 ntTSL 1 (best) BASIC8.08□□□□□ -1.12
Col4a1P02463 Gm13114-201ENSMUST00000117605 106 ntBASIC8.08□□□□□ -1.12
Col4a1P02463 Gm11624-201ENSMUST00000118579 1041 ntBASIC8.08□□□□□ -1.12
Col4a1P02463 Gm12565-201ENSMUST00000119004 649 ntBASIC8.08□□□□□ -1.12
Col4a1P02463 Gm25782-201ENSMUST00000122526 289 ntBASIC8.08□□□□□ -1.12
Col4a1P02463 Gm17044-201ENSMUST00000168549 828 ntBASIC8.08□□□□□ -1.12
Retrieved 100 of 76,532 protein–RNA pairs in 81.1 ms