Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm9045-201ENSMUST00000219760 2409 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Srp54bE9PXC0 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Srp54bE9PXC0 Usp14-202ENSMUST00000116669 2019 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Srp54bE9PXC0 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.82□□□□□ -1.32
Srp54bE9PXC0 Gm45753-201ENSMUST00000116473 2753 ntAPPRIS P1 TSL 2 BASIC6.82□□□□□ -1.32
Srp54bE9PXC0 Chd9-205ENSMUST00000209423 9419 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Srp54bE9PXC0 Rlim-201ENSMUST00000070705 7429 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Srp54bE9PXC0 Gm15813-201ENSMUST00000142286 2541 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Srp54bE9PXC0 4930444G20Rik-201ENSMUST00000092672 1773 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Srp54bE9PXC0 Sox6-205ENSMUST00000169129 5122 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Srp54bE9PXC0 Prg4-203ENSMUST00000111902 3636 ntTSL 5 BASIC6.82□□□□□ -1.32
Srp54bE9PXC0 Gm44620-201ENSMUST00000209183 2887 ntBASIC6.82□□□□□ -1.32
Srp54bE9PXC0 Spta1-201ENSMUST00000027817 8406 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Srp54bE9PXC0 Ksr2-202ENSMUST00000180430 13125 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
Srp54bE9PXC0 1700041M19Rik-205ENSMUST00000208105 1356 ntTSL 5 BASIC6.82□□□□□ -1.32
Srp54bE9PXC0 Abca8b-201ENSMUST00000020948 7423 ntAPPRIS P2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Srp54bE9PXC0 Tnik-214ENSMUST00000162485 3918 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
Srp54bE9PXC0 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Srp54bE9PXC0 Gm45221-201ENSMUST00000207822 2272 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Lrrc37a-201ENSMUST00000153273 9647 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Nck1-201ENSMUST00000112874 1513 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Phf6-202ENSMUST00000101587 3639 ntTSL 2 BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm38276-201ENSMUST00000192446 1343 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm19024-201ENSMUST00000194681 1319 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 AC132465.1-201ENSMUST00000219938 1307 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Fbxw28-202ENSMUST00000112040 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Lpin1-204ENSMUST00000221230 4114 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Ttc21b-202ENSMUST00000125446 4061 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Serpinb9-201ENSMUST00000006391 3397 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm45645-201ENSMUST00000211470 1963 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Dopey1-218ENSMUST00000190957 9187 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Olfr131-203ENSMUST00000215940 1614 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm43789-201ENSMUST00000199275 2472 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Igkv4-90-201ENSMUST00000103334 352 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gmfg-203ENSMUST00000108292 657 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Zfp616-203ENSMUST00000116546 531 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Snord88a-201ENSMUST00000116723 90 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm14116-201ENSMUST00000117733 805 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm12583-201ENSMUST00000120677 853 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm8722-201ENSMUST00000121466 769 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm15859-201ENSMUST00000132069 710 ntTSL 5 BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm13211-201ENSMUST00000141649 697 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 4933407I08Rik-201ENSMUST00000151215 1294 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 1700057H21Rik-201ENSMUST00000152467 383 ntTSL 5 BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm24176-201ENSMUST00000158928 121 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Mir3471-2-201ENSMUST00000174896 102 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Mir6921-201ENSMUST00000183719 80 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm27186-201ENSMUST00000184223 307 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 1700016G22Rik-202ENSMUST00000186843 594 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm38068-201ENSMUST00000192546 540 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm31048-201ENSMUST00000196103 1061 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm19185-201ENSMUST00000196365 643 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm43434-201ENSMUST00000196615 676 ntTSL 3 BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm5717-201ENSMUST00000198243 1062 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Ighv1-83-201ENSMUST00000199643 351 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Ghrl-207ENSMUST00000204533 323 ntTSL 2 BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm44788-201ENSMUST00000207605 385 ntTSL 5 BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 4930567H12Rik-201ENSMUST00000212260 955 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 AC163684.1-201ENSMUST00000223766 927 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 AC138329.1-201ENSMUST00000225040 471 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 AC154640.1-202ENSMUST00000227828 496 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Cyp2c29-202ENSMUST00000176624 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Trrap-203ENSMUST00000100467 12479 ntAPPRIS P2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 2700078F05Rik-201ENSMUST00000194331 3244 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Cfap221-202ENSMUST00000174370 2871 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Ppp3r2-201ENSMUST00000029991 3026 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Accs-203ENSMUST00000111246 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Pramel-201ENSMUST00000118979 1383 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm43123-201ENSMUST00000201893 3471 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm43497-201ENSMUST00000201137 2316 ntBASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Srp54bE9PXC0 Gm37262-201ENSMUST00000192816 1818 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm36283-203ENSMUST00000220211 3732 ntTSL 5 BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Il1a-201ENSMUST00000028882 1974 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm43189-201ENSMUST00000196040 3069 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Olfr1175-ps-201ENSMUST00000214207 5552 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Amot-202ENSMUST00000112836 6957 ntAPPRIS P2 TSL 5 BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Plch1-213ENSMUST00000177143 6010 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Mbd4-202ENSMUST00000122816 2415 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm42772-201ENSMUST00000199945 3041 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Pde1a-203ENSMUST00000102652 1646 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm37730-201ENSMUST00000192432 2211 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm38218-201ENSMUST00000193555 4689 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm37653-201ENSMUST00000195401 3578 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Nudt5-201ENSMUST00000026927 4764 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Adgb-204ENSMUST00000172530 5215 ntAPPRIS P5 TSL 5 BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Gm37621-201ENSMUST00000194716 5531 ntBASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Ubxn7-201ENSMUST00000115151 10318 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Igkv4-57-1-201ENSMUST00000103356 373 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Srp54bE9PXC0 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 81 ms