Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm37216-201ENSMUST00000193817 3478 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Ttf1-201ENSMUST00000100237 4160 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Anapc10-203ENSMUST00000210812 4591 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Zfp825-203ENSMUST00000221173 1549 ntAPPRIS ALT2 TSL 3 BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Gm6679-201ENSMUST00000191467 1869 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Rpl31-ps10-201ENSMUST00000116034 378 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Rpl31-ps11-201ENSMUST00000119898 377 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Rpl31-ps12-201ENSMUST00000119957 375 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Gm14503-201ENSMUST00000130337 1164 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 C230035I16Rik-201ENSMUST00000141543 623 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 4931413K12Rik-201ENSMUST00000142068 1282 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Gm25281-201ENSMUST00000157270 104 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Gm24286-201ENSMUST00000157632 128 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Gm16138-201ENSMUST00000159341 821 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Obox3-ps3-201ENSMUST00000177242 1004 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 1700054K02Rik-201ENSMUST00000181755 376 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Rpl31-ps8-201ENSMUST00000181935 378 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Gm9114-201ENSMUST00000188558 997 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Rpl31-206ENSMUST00000195123 356 ntTSL 3 BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 4933402C06Rik-203ENSMUST00000207559 1227 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Gm35021-202ENSMUST00000210289 961 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Olfr1010-201ENSMUST00000216831 1270 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 CT009742.1-201ENSMUST00000222507 702 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 AC154380.1-201ENSMUST00000226804 720 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Olfr1361-201ENSMUST00000055615 954 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Rpl31-ps4-201ENSMUST00000079114 390 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Rpl31-ps9-201ENSMUST00000086596 378 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Olfr653-201ENSMUST00000098174 1046 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Celf2-226ENSMUST00000183209 3852 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Zcchc7-208ENSMUST00000147272 4251 ntTSL 2 BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Gm36186-201ENSMUST00000200820 2052 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Olfr1250-202ENSMUST00000111527 4386 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Kel-201ENSMUST00000031899 2530 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Smarca2-242ENSMUST00000208751 1846 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Olfr1426-201ENSMUST00000112952 2697 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 AC107763.1-202ENSMUST00000225021 2663 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 4931406B18Rik-201ENSMUST00000013497 3970 ntAPPRIS P2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Vwde-201ENSMUST00000054530 3979 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 AC187103.1-201ENSMUST00000224641 1475 ntBASIC6.41□□□□□ -1.38
Trim3Q9R1R2 F830045P16Rik-201ENSMUST00000050309 1925 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Xrcc4-201ENSMUST00000022115 1540 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Bbs12-201ENSMUST00000057975 2433 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Cnga1-202ENSMUST00000126799 2061 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Gm37967-201ENSMUST00000195634 2665 ntBASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Gm44626-201ENSMUST00000207035 2715 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Ccdc191-203ENSMUST00000132859 3779 ntAPPRIS ALT2 TSL 5 BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Olfr446-201ENSMUST00000101461 927 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Mir697-201ENSMUST00000102316 109 ntBASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Gm22781-201ENSMUST00000104083 137 ntBASIC6.4□□□□□ -1.38
Trim3Q9R1R2 n-R5s48-201ENSMUST00000122482 110 ntBASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Gm22533-201ENSMUST00000158821 274 ntBASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Gm6434-201ENSMUST00000163316 372 ntBASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Gm3373-201ENSMUST00000169087 516 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Gm4373-201ENSMUST00000178571 556 ntBASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Gm26570-201ENSMUST00000180672 342 ntBASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Gm8245-201ENSMUST00000182434 987 ntBASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Gm27185-201ENSMUST00000184296 247 ntBASIC6.4□□□□□ -1.38
Trim3Q9R1R2 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Gm28425-202ENSMUST00000191542 621 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Ighv1-30-201ENSMUST00000194082 349 ntBASIC6.4□□□□□ -1.38
Trim3Q9R1R2 4930572K03Rik-201ENSMUST00000196713 931 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Gm42580-201ENSMUST00000197223 753 ntBASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Fabp7-201ENSMUST00000020024 804 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Gm34333-201ENSMUST00000200363 669 ntTSL 3 BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Gm8168-201ENSMUST00000209631 948 ntBASIC6.4□□□□□ -1.38
Trim3Q9R1R2 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 AC138765.3-201ENSMUST00000227981 423 ntBASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Spata31d1d-201ENSMUST00000052978 3827 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Olfr862-201ENSMUST00000073765 1035 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Defa24-201ENSMUST00000080533 419 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Sry-201ENSMUST00000091178 1188 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Vpreb3-201ENSMUST00000000926 625 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.38
Trim3Q9R1R2 Etnppl-201ENSMUST00000072271 4468 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim3Q9R1R2 AC117608.1-201ENSMUST00000225500 3418 ntBASIC6.4□□□□□ -1.39
Trim3Q9R1R2 E030032P16Rik-201ENSMUST00000198813 2931 ntBASIC6.4□□□□□ -1.39
Trim3Q9R1R2 C87977-204ENSMUST00000105757 1885 ntAPPRIS P2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim3Q9R1R2 Plb1-201ENSMUST00000101376 4699 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
Trim3Q9R1R2 Ccdc83-203ENSMUST00000107221 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim3Q9R1R2 Ptpra-202ENSMUST00000077303 3066 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Trim3Q9R1R2 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Trim3Q9R1R2 Svs2-202ENSMUST00000109374 1479 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim3Q9R1R2 Bbx-205ENSMUST00000114488 3293 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.39
Trim3Q9R1R2 Map2-203ENSMUST00000114012 5119 ntTSL 1 (best) BASIC6.4□□□□□ -1.39
Trim3Q9R1R2 AC154597.1-201ENSMUST00000224095 2713 ntBASIC6.4□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 89.3 ms