Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 Gm5528-201ENSMUST00000076314 480 ntBASIC6.68□□□□□ -1.34
Msh4Q99MT2 Gm22053-201ENSMUST00000083394 200 ntBASIC6.68□□□□□ -1.34
Msh4Q99MT2 Tnfrsf22-202ENSMUST00000084396 564 ntAPPRIS P3 TSL 2 BASIC6.68□□□□□ -1.34
Msh4Q99MT2 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.68□□□□□ -1.34
Msh4Q99MT2 Cmah-208ENSMUST00000224819 9482 ntBASIC6.68□□□□□ -1.34
Msh4Q99MT2 Gm9268-201ENSMUST00000166914 2586 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Msh4Q99MT2 Vmn2r62-201ENSMUST00000169130 2580 ntAPPRIS P1 TSL 5 BASIC6.68□□□□□ -1.34
Msh4Q99MT2 Gm9268-202ENSMUST00000173815 2565 ntAPPRIS P2 TSL 5 BASIC6.68□□□□□ -1.34
Msh4Q99MT2 Sell-203ENSMUST00000192047 5703 ntTSL 1 (best) BASIC6.68□□□□□ -1.34
Msh4Q99MT2 Zfp568-202ENSMUST00000146074 6867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.68□□□□□ -1.34
Msh4Q99MT2 Olfr745-202ENSMUST00000213127 1930 ntTSL 5 BASIC6.68□□□□□ -1.34
Msh4Q99MT2 Gm30849-201ENSMUST00000214503 1379 ntTSL 5 BASIC6.68□□□□□ -1.34
Msh4Q99MT2 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC6.68□□□□□ -1.34
Msh4Q99MT2 Sp100-212ENSMUST00000153574 1653 ntTSL 5 BASIC6.68□□□□□ -1.34
Msh4Q99MT2 Atf7-210ENSMUST00000184616 7147 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm17477-201ENSMUST00000165458 2581 ntTSL 5 BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 Trmt5-201ENSMUST00000116420 2066 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm5512-202ENSMUST00000220222 1522 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 Clec2g-201ENSMUST00000000254 2463 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Slc6a14-201ENSMUST00000033414 3434 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Vcam1-203ENSMUST00000196449 2532 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Zfp966-202ENSMUST00000109018 733 ntTSL 3 BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Zfp968-202ENSMUST00000109048 733 ntTSL 3 BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm14893-201ENSMUST00000117904 282 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm15421-202ENSMUST00000118224 399 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm16726-201ENSMUST00000130184 892 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Pramef12os-201ENSMUST00000133334 767 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm15527-201ENSMUST00000138259 858 ntTSL 3 BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm23762-201ENSMUST00000158348 106 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm16112-201ENSMUST00000159075 382 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm16138-201ENSMUST00000159341 821 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 4930486I03Rik-201ENSMUST00000161509 788 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm8245-201ENSMUST00000182434 987 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.67□□□□□ -1.34
Msh4Q99MT2 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm2860-201ENSMUST00000199226 707 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 Pde6h-203ENSMUST00000204382 211 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm44836-201ENSMUST00000205869 336 ntTSL 5 BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm5119-201ENSMUST00000215858 634 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 4930471E15Rik-201ENSMUST00000221147 626 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 AC121137.1-201ENSMUST00000225272 602 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 Spcs1-206ENSMUST00000228736 702 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Olfr1265-201ENSMUST00000080311 930 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Msh4Q99MT2 n-R5s169-201ENSMUST00000083110 120 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm10160-201ENSMUST00000085094 201 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Olfr1269-201ENSMUST00000099756 1018 ntAPPRIS P1 BASIC6.67□□□□□ -1.34
Msh4Q99MT2 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Polk-204ENSMUST00000221645 1644 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Mettl6-201ENSMUST00000055303 3946 ntAPPRIS P2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm10650-202ENSMUST00000196581 1969 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm5084-202ENSMUST00000224064 3609 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm38368-201ENSMUST00000193181 1335 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm31805-201ENSMUST00000211921 4031 ntTSL 3 BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Adam28-202ENSMUST00000111072 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Tns4-201ENSMUST00000017751 4755 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 Skint11-204ENSMUST00000164297 1393 ntAPPRIS P1 TSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 E330018M18Rik-201ENSMUST00000209455 1383 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Nyap2-204ENSMUST00000123720 3471 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 AC122024.1-201ENSMUST00000219276 4850 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 AC129085.2-201ENSMUST00000223763 2800 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm42668-201ENSMUST00000200747 2487 ntBASIC6.67□□□□□ -1.34
Msh4Q99MT2 Olfr1441-203ENSMUST00000216506 2131 ntAPPRIS P1 TSL 5 BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.67□□□□□ -1.34
Msh4Q99MT2 Vmn2r-ps159-203ENSMUST00000189559 2560 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm37410-201ENSMUST00000193623 3039 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Olfr62-203ENSMUST00000217013 2654 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Taf1-201ENSMUST00000101341 8054 ntAPPRIS ALT2 TSL 2 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm33968-201ENSMUST00000211015 1562 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm43707-201ENSMUST00000196451 3187 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 Dmtf1-207ENSMUST00000183973 2408 ntAPPRIS ALT1 TSL 5 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm15930-201ENSMUST00000156603 2037 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gramd1c-204ENSMUST00000214098 2046 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Il1rapl1-201ENSMUST00000078875 2091 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Usp17lc-201ENSMUST00000079348 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm22774-201ENSMUST00000102084 109 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 4930405D11Rik-203ENSMUST00000142521 645 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Cav1-209ENSMUST00000150901 380 ntTSL 2 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm24680-201ENSMUST00000158759 126 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 Obox3-204ENSMUST00000173912 1244 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm24157-201ENSMUST00000175265 111 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 Klk1b7-ps-202ENSMUST00000183762 619 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 Vmn1r189-201ENSMUST00000186062 1137 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm18183-201ENSMUST00000191024 615 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm20877-202ENSMUST00000191358 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm37950-201ENSMUST00000191616 364 ntTSL 3 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 1110003F10Rik-201ENSMUST00000199441 767 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gpn1-206ENSMUST00000202394 631 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm44603-201ENSMUST00000206820 367 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 AC142113.2-201ENSMUST00000217425 748 ntBASIC6.66□□□□□ -1.34
Msh4Q99MT2 Gm18899-201ENSMUST00000217663 546 ntBASIC6.66□□□□□ -1.34
Retrieved 100 of 76,532 protein–RNA pairs in 75.1 ms