Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 AC152169.2-201ENSMUST00000224558 613 ntBASIC7.45□□□□□ -1.22
Trim9Q8C7M3 AC125064.1-201ENSMUST00000225801 295 ntBASIC7.45□□□□□ -1.22
Trim9Q8C7M3 Gm39214-201ENSMUST00000210912 1542 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim9Q8C7M3 Olfr119-201ENSMUST00000080483 1541 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim9Q8C7M3 Clasp1-212ENSMUST00000189262 6918 ntAPPRIS ALT2 TSL 5 BASIC7.45□□□□□ -1.22
Trim9Q8C7M3 AC121286.2-201ENSMUST00000218069 2470 ntBASIC7.45□□□□□ -1.22
Trim9Q8C7M3 Olfr1160-202ENSMUST00000215457 6042 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Trim9Q8C7M3 Gm10555-201ENSMUST00000193178 1791 ntBASIC7.45□□□□□ -1.22
Trim9Q8C7M3 Lmo3-204ENSMUST00000162772 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim9Q8C7M3 Cpsf6-201ENSMUST00000069168 6526 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim9Q8C7M3 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC7.45□□□□□ -1.22
Trim9Q8C7M3 AC124680.1-201ENSMUST00000223923 1585 ntBASIC7.45□□□□□ -1.22
Trim9Q8C7M3 Gnb1-208ENSMUST00000176637 2832 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim9Q8C7M3 B930025P03Rik-201ENSMUST00000207718 3085 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim9Q8C7M3 Olfr285-202ENSMUST00000216901 5330 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Trim9Q8C7M3 D830026I12Rik-203ENSMUST00000151170 1607 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim9Q8C7M3 4933400F21Rik-203ENSMUST00000187295 2633 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
Trim9Q8C7M3 Gm21663-201ENSMUST00000196214 2864 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
Trim9Q8C7M3 Gm5084-202ENSMUST00000224064 3609 ntBASIC7.45□□□□□ -1.22
Trim9Q8C7M3 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
Trim9Q8C7M3 Dthd1-201ENSMUST00000170704 2427 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm37216-201ENSMUST00000193817 3478 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Wdr64-203ENSMUST00000194087 3225 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Olfr600-202ENSMUST00000215042 3527 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm10280-201ENSMUST00000212238 2006 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Olfr458-202ENSMUST00000216650 1799 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 2610001J05Rik-201ENSMUST00000139231 3177 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Mef2c-227ENSMUST00000199432 3498 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Clasp1-210ENSMUST00000188710 10265 ntAPPRIS ALT2 TSL 5 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm23748-201ENSMUST00000104227 131 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm4732-201ENSMUST00000118778 473 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm15186-201ENSMUST00000119345 563 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Olfr999-ps1-201ENSMUST00000122319 949 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 A330102I10Rik-201ENSMUST00000130109 501 ntTSL 2 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 4930513N10Rik-202ENSMUST00000132616 490 ntTSL 3 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm15322-201ENSMUST00000142621 739 ntTSL 2 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm15875-201ENSMUST00000152264 273 ntTSL 3 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm11840-201ENSMUST00000156947 696 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm22588-201ENSMUST00000157510 140 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm24781-201ENSMUST00000157636 117 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm24157-201ENSMUST00000175265 111 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm20691-201ENSMUST00000176889 333 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Rps19-ps8-201ENSMUST00000180714 422 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm27156-201ENSMUST00000184589 754 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm2453-201ENSMUST00000193383 357 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Olfr726-202ENSMUST00000206834 1256 ntAPPRIS P1 TSL 3 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm45394-201ENSMUST00000209240 1175 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm45703-201ENSMUST00000212293 891 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm18377-201ENSMUST00000215141 607 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Olfr1233-203ENSMUST00000215469 1205 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm2398-201ENSMUST00000218347 883 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 AC155709.1-201ENSMUST00000218794 162 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 AC154558.1-201ENSMUST00000222278 415 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 AC124395.1-201ENSMUST00000225940 707 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 AC154640.1-202ENSMUST00000227828 496 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Fsip1-201ENSMUST00000028820 1025 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Nat8f2-201ENSMUST00000045008 3301 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 AC159624.1-201ENSMUST00000217762 1344 ntBASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Ddx19b-201ENSMUST00000040241 6612 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Shprh-202ENSMUST00000054814 7225 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 C2cd3-201ENSMUST00000051777 7803 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm15448-205ENSMUST00000189095 1905 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gabpb2-202ENSMUST00000098873 8272 ntAPPRIS P2 TSL 5 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Gm44956-201ENSMUST00000208277 2887 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Olfr62-202ENSMUST00000213189 2570 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Zfp934-208ENSMUST00000222429 1653 ntTSL 3 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Grip1-208ENSMUST00000138410 3532 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 BC067074-201ENSMUST00000078163 3546 ntTSL 5 BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
Trim9Q8C7M3 Ptprz1-206ENSMUST00000202579 6871 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Bmi1-202ENSMUST00000051929 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Lonrf2-201ENSMUST00000039612 5077 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Gm28993-201ENSMUST00000186236 1499 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Gm37870-201ENSMUST00000192349 1499 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Gm37467-202ENSMUST00000192785 1499 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Gm37252-201ENSMUST00000195063 1499 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Gm38013-202ENSMUST00000195453 1499 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Gm37286-201ENSMUST00000195885 1499 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Tbc1d24-213ENSMUST00000201805 3806 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim9Q8C7M3 A330023F24Rik-202ENSMUST00000181273 4217 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Aox4-201ENSMUST00000040442 4973 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Adgrb3-203ENSMUST00000126626 2953 ntTSL 1 (best) BASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Zcchc18-201ENSMUST00000033804 4733 ntAPPRIS P1 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Cnot2-210ENSMUST00000168036 2693 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim9Q8C7M3 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Gm45876-201ENSMUST00000212698 2709 ntBASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Amelx-202ENSMUST00000112118 799 ntAPPRIS ALT2 TSL 1 (best) BASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Gm12467-201ENSMUST00000117625 745 ntBASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Gm13265-201ENSMUST00000118090 421 ntBASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Gm14870-201ENSMUST00000118414 156 ntBASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Gm12174-201ENSMUST00000119853 813 ntBASIC7.43□□□□□ -1.22
Trim9Q8C7M3 6430710C18Rik-202ENSMUST00000125746 509 ntTSL 5 BASIC7.43□□□□□ -1.22
Trim9Q8C7M3 H2-Ea-ps-201ENSMUST00000134042 686 ntBASIC7.43□□□□□ -1.22
Trim9Q8C7M3 Gm5861-201ENSMUST00000168407 1016 ntAPPRIS ALT2 TSL 5 BASIC7.43□□□□□ -1.22
Retrieved 100 of 76,532 protein–RNA pairs in 61.3 ms