Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 Gm12181-201ENSMUST00000121448 531 ntBASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Gm11434-201ENSMUST00000122379 629 ntBASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Gm16224-201ENSMUST00000127711 412 ntTSL 3 BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Gm15407-201ENSMUST00000136919 634 ntTSL 3 BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Gm23031-201ENSMUST00000157998 119 ntBASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Obox4-ps30-201ENSMUST00000176032 948 ntBASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 1700120O09Rik-201ENSMUST00000177127 977 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Gm26654-201ENSMUST00000180455 256 ntTSL 3 BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Gm27360-201ENSMUST00000183487 80 ntBASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 1110008L16Rik-206ENSMUST00000184980 888 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 1700108F19Rik-208ENSMUST00000191447 660 ntTSL 5 BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Gm42626-201ENSMUST00000196866 1148 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Gm23011-202ENSMUST00000197855 275 ntBASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Ndufa4-204ENSMUST00000204714 452 ntAPPRIS P1 TSL 3 BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Gm7706-201ENSMUST00000209946 388 ntTSL 3 BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 AC116589.2-201ENSMUST00000220469 478 ntTSL 3 BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Sprr2b-201ENSMUST00000061038 784 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Tnfrsf22-201ENSMUST00000075588 4170 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Sytl2-203ENSMUST00000107211 3790 ntAPPRIS P4 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Adsl-201ENSMUST00000023043 3712 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Zfp266-201ENSMUST00000068296 2266 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Gm26544-201ENSMUST00000181404 2763 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Gm8113-201ENSMUST00000160298 2721 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
Cldn3Q9Z0G9 Tmcc3-203ENSMUST00000117929 3317 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm26899-201ENSMUST00000181963 3328 ntTSL 5 BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Dennd1b-201ENSMUST00000094505 8073 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Adh7-201ENSMUST00000090171 3432 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Olfr401-202ENSMUST00000213754 2227 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm13416-201ENSMUST00000117264 1612 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Ankrd66-201ENSMUST00000178772 1321 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Ezh1-203ENSMUST00000107285 4193 ntAPPRIS P2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Mir708-201ENSMUST00000102189 109 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm25593-201ENSMUST00000102272 96 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Trbv1-201ENSMUST00000103262 417 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Clec4n-203ENSMUST00000117130 1136 ntAPPRIS ALT2 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm13732-201ENSMUST00000117753 535 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm12535-201ENSMUST00000121025 484 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm13462-201ENSMUST00000121472 961 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 2210409E12Rik-201ENSMUST00000122062 346 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm8715-201ENSMUST00000162728 531 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm6726-201ENSMUST00000172786 681 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Csnk2b-209ENSMUST00000174779 632 ntTSL 2 BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm24157-201ENSMUST00000175265 111 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 D13Ertd608e-201ENSMUST00000179131 417 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Rpl31-ps25-201ENSMUST00000181557 379 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm27507-201ENSMUST00000184199 93 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm28929-201ENSMUST00000185330 1193 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 1700003P14Rik-201ENSMUST00000185602 1078 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 6030442E23Rik-201ENSMUST00000186618 642 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm28340-201ENSMUST00000189218 202 ntTSL 3 BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 1700054O19Rik-201ENSMUST00000193604 868 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm44342-201ENSMUST00000196874 129 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Mark1-ps2-201ENSMUST00000197823 384 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm5711-201ENSMUST00000197896 421 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm44383-201ENSMUST00000198940 129 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm45024-201ENSMUST00000208274 623 ntTSL 3 BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 AC153847.1-201ENSMUST00000214524 353 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm46203-201ENSMUST00000218130 478 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Erh-204ENSMUST00000218364 665 ntTSL 3 BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm19047-201ENSMUST00000220922 1099 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm34639-202ENSMUST00000223473 649 ntTSL 1 (best) BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Olfr1501-201ENSMUST00000073966 948 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Olfr195-201ENSMUST00000075381 995 ntAPPRIS P1 BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Mir196a-1-201ENSMUST00000083612 102 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Hus1-201ENSMUST00000020683 4640 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Dsg1b-201ENSMUST00000076737 3965 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Gm18451-201ENSMUST00000196759 1719 ntBASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Hydin-201ENSMUST00000043141 15783 ntAPPRIS P1 TSL 1 (best) BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Tnik-211ENSMUST00000161964 3807 ntAPPRIS ALT2 TSL 5 BASIC6.84□□□□□ -1.31
Cldn3Q9Z0G9 Olfr716-205ENSMUST00000214819 3485 ntAPPRIS P1 TSL 5 BASIC6.84□□□□□ -1.32
Cldn3Q9Z0G9 Gm43549-201ENSMUST00000198856 2661 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Gabpb2-204ENSMUST00000107209 8357 ntAPPRIS P2 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Tatdn1-201ENSMUST00000110155 1364 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 E330011O21Rik-204ENSMUST00000210839 1361 ntTSL 5 BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 4930449A18Rik-201ENSMUST00000094228 2071 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 4930594C11Rik-201ENSMUST00000192316 2755 ntBASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Kcnj16-206ENSMUST00000180023 3701 ntAPPRIS P1 TSL 3 BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Pde10a-207ENSMUST00000115722 3673 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Fhl4-201ENSMUST00000059383 3402 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Zfp78-202ENSMUST00000108559 1539 ntAPPRIS P4 TSL 2 BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Tpmt-202ENSMUST00000110118 881 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Rbpsuh-ps1-201ENSMUST00000119456 1006 ntBASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Gm15007-201ENSMUST00000119982 710 ntBASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Gm6142-201ENSMUST00000120290 325 ntBASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Tbata-208ENSMUST00000143207 982 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Gm12629-201ENSMUST00000145751 711 ntTSL 3 BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Gm14764-201ENSMUST00000147130 313 ntTSL 5 BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 1810041H14Rik-203ENSMUST00000187773 416 ntTSL 5 BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
Cldn3Q9Z0G9 Gm29383-201ENSMUST00000188284 480 ntBASIC6.83□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 68.3 ms