Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Gm25498-201ENSMUST00000104424 129 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm13030-201ENSMUST00000105805 655 ntAPPRIS P1 TSL 3 BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm13400-201ENSMUST00000117436 380 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Tm6sf1-202ENSMUST00000119543 1066 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm15316-201ENSMUST00000121082 421 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm15932-201ENSMUST00000135068 535 ntTSL 5 BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 4933401B06Rik-202ENSMUST00000142024 1219 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Vmn1r-ps78-201ENSMUST00000178185 924 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Vmn1r-ps76-201ENSMUST00000179492 924 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Trav6d-5-201ENSMUST00000180687 338 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 1700109K24Rik-201ENSMUST00000181870 1045 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm17750-201ENSMUST00000182477 529 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Mir6987-201ENSMUST00000184789 73 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Krtdap-203ENSMUST00000187493 420 ntTSL 2 BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm28286-201ENSMUST00000188704 586 ntTSL 2 BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Krtdap-206ENSMUST00000189962 323 ntTSL 3 BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm29566-201ENSMUST00000190627 457 ntTSL 5 BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Krtdap-209ENSMUST00000190990 403 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm18752-201ENSMUST00000192876 608 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm8182-201ENSMUST00000197863 769 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Igkv4-77-201ENSMUST00000199410 352 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 AC155941.3-201ENSMUST00000218476 308 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm46231-201ENSMUST00000220152 314 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm10126-201ENSMUST00000221732 168 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 AC124489.1-201ENSMUST00000225852 526 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 AC115304.1-202ENSMUST00000226850 837 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 AC121542.2-201ENSMUST00000227529 400 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Olfr691-201ENSMUST00000057528 969 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm22053-201ENSMUST00000083394 200 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Krtdap-201ENSMUST00000098559 470 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Ttc12-201ENSMUST00000055096 3628 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Cyp2j8-201ENSMUST00000124729 1512 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 BC053393-201ENSMUST00000050937 2020 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Il13ra2-201ENSMUST00000033646 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Atp2b4-206ENSMUST00000143567 11725 ntAPPRIS P3 TSL 5 BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Cenpf-204ENSMUST00000171929 11130 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm20043-201ENSMUST00000222267 2565 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm20754-202ENSMUST00000192642 1357 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Hsp90aa1-201ENSMUST00000021698 2852 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm10258-201ENSMUST00000091270 2123 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.43□□□□□ -1.38
Trim3Q9R1R2 Dcdc5-202ENSMUST00000122388 4957 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm28667-201ENSMUST00000189873 2171 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Myt1l-202ENSMUST00000049784 7202 ntAPPRIS P4 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Copa-201ENSMUST00000027833 4351 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Olfr1426-203ENSMUST00000217952 3058 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm10475-201ENSMUST00000084713 1796 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Nlrp1c-ps-202ENSMUST00000174668 3422 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Cyp4a10-202ENSMUST00000094886 2052 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Zwint-202ENSMUST00000105431 2676 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm25311-201ENSMUST00000104136 132 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm11657-201ENSMUST00000137175 337 ntTSL 3 BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm26183-201ENSMUST00000157685 139 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm23276-201ENSMUST00000157913 138 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm23762-201ENSMUST00000158348 106 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm24680-201ENSMUST00000158759 126 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm24228-201ENSMUST00000158829 129 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm17022-201ENSMUST00000166415 922 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm17212-201ENSMUST00000166666 259 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Trat1-201ENSMUST00000170861 684 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm19815-201ENSMUST00000175818 335 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Platr2-201ENSMUST00000180834 521 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm27014-201ENSMUST00000182658 937 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm29383-201ENSMUST00000188284 480 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm38102-202ENSMUST00000196428 174 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm9710-201ENSMUST00000198053 499 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm42883-201ENSMUST00000202594 222 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm21054-201ENSMUST00000203981 380 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm19324-201ENSMUST00000213229 1169 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm5119-201ENSMUST00000215858 634 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 5033421B08Rik-202ENSMUST00000219595 1194 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm31763-203ENSMUST00000219739 1025 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm5080-201ENSMUST00000220341 743 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 D830013O20Rik-202ENSMUST00000221180 683 ntTSL 2 BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 AC115735.5-201ENSMUST00000228386 397 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Rps27rt-201ENSMUST00000053150 374 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Olfr420-201ENSMUST00000068403 1046 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Hamp2-201ENSMUST00000074671 420 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Olfr535-201ENSMUST00000074897 991 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm5528-201ENSMUST00000076314 480 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm26816-201ENSMUST00000180679 2448 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm43285-201ENSMUST00000196563 3592 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm10307-201ENSMUST00000189839 1337 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Top2a-201ENSMUST00000068031 5221 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Cldn12-202ENSMUST00000115445 3477 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim3Q9R1R2 Gm44661-201ENSMUST00000208830 3503 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 AC122769.1-201ENSMUST00000226930 1714 ntBASIC6.42□□□□□ -1.38
Trim3Q9R1R2 4732465J04Rik-202ENSMUST00000187483 2744 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim3Q9R1R2 Zfp74-202ENSMUST00000108205 3711 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 108.1 ms