Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Nostrin-201ENSMUST00000041865 1808 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Zscan21-204ENSMUST00000110960 2204 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gjc3-201ENSMUST00000077119 4002 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Prkacb-204ENSMUST00000106138 3999 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Zfp599-201ENSMUST00000086281 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Fam60a-211ENSMUST00000204435 2785 ntAPPRIS P1 TSL 5 BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Rgsl1-203ENSMUST00000141249 1752 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm5157-201ENSMUST00000185914 1581 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
Scrt1Q99M85 Gm3555-201ENSMUST00000160287 1395 ntBASIC6.06□□□□□ -1.44
Scrt1Q99M85 Ankrd36-202ENSMUST00000109856 4491 ntAPPRIS P2 TSL 2 BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Sh3rf2-202ENSMUST00000074679 4444 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Sp1-201ENSMUST00000001326 7754 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm30931-202ENSMUST00000211698 1320 ntTSL 3 BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Slc38a6-208ENSMUST00000153941 3927 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Nsun4-202ENSMUST00000030475 2439 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Olfr311-203ENSMUST00000216473 2961 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Kif6-207ENSMUST00000162854 3528 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Vmn2r118-201ENSMUST00000168440 2562 ntAPPRIS P1 TSL 5 BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Trim43b-202ENSMUST00000189557 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm22370-201ENSMUST00000102422 83 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm24709-201ENSMUST00000104123 132 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm11462-201ENSMUST00000117749 562 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm11501-201ENSMUST00000118039 581 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm14729-201ENSMUST00000118373 689 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm14466-201ENSMUST00000119028 451 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm15618-201ENSMUST00000121610 452 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm15963-201ENSMUST00000131387 876 ntTSL 5 BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm24286-201ENSMUST00000157632 128 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm27030-201ENSMUST00000182551 464 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Mir6971-201ENSMUST00000183497 63 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm29201-201ENSMUST00000189120 431 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm37689-201ENSMUST00000193139 275 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm37152-201ENSMUST00000193369 1175 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm37072-201ENSMUST00000194570 837 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm7285-201ENSMUST00000198801 580 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm18995-201ENSMUST00000202981 520 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm9367-201ENSMUST00000205703 546 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Olfr882-ps1-201ENSMUST00000211842 450 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 AC154323.2-201ENSMUST00000226557 1151 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Klrb1a-201ENSMUST00000032512 1274 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Vmn1r218-201ENSMUST00000074992 897 ntAPPRIS P2 BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Olfr1129-201ENSMUST00000081034 945 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Scrt1Q99M85 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Mir138-1-201ENSMUST00000083480 99 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 4933425L06Rik-201ENSMUST00000022232 2157 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Vmn1r90-203ENSMUST00000226510 6674 ntAPPRIS ALT2 BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm6866-201ENSMUST00000188559 2549 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 5830432E09Rik-201ENSMUST00000180693 3569 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Kcnu1-202ENSMUST00000120653 1446 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Sspn-203ENSMUST00000111702 4415 ntTSL 2 BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Myrfl-201ENSMUST00000048229 3164 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Scrt1Q99M85 C230057A21Rik-201ENSMUST00000194944 3331 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Cytip-201ENSMUST00000028175 6110 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Vgll1-201ENSMUST00000033465 2281 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Zscan4d-201ENSMUST00000067210 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Scrt1Q99M85 4833423E24Rik-201ENSMUST00000099923 2272 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Brd8-201ENSMUST00000003876 4468 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Gm14896-201ENSMUST00000121311 1351 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Obox4-ps28-201ENSMUST00000175654 1362 ntBASIC6.05□□□□□ -1.44
Scrt1Q99M85 Nif3l1-201ENSMUST00000087521 3769 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Scrt1Q99M85 Fbxw20-201ENSMUST00000079548 1511 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Blm-201ENSMUST00000081314 4598 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm45001-201ENSMUST00000208279 2515 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 U2surp-201ENSMUST00000078374 3520 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm31410-201ENSMUST00000217302 4048 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm3460-201ENSMUST00000167882 1809 ntAPPRIS P5 TSL 5 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm9575-201ENSMUST00000122140 1339 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Mdm4-202ENSMUST00000067429 3490 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Lrrcc1-206ENSMUST00000169079 5638 ntAPPRIS ALT2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Olfr435-202ENSMUST00000215565 2491 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm42969-201ENSMUST00000199858 3631 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Olfr1155-203ENSMUST00000215903 2122 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Lhx9-203ENSMUST00000093486 4551 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Fbxw7-203ENSMUST00000107678 4073 ntAPPRIS ALT1 TSL 5 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Rasgrf1-202ENSMUST00000034912 4092 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm20597-201ENSMUST00000218774 5486 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Vmn2r58-201ENSMUST00000171671 2589 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Trp63-202ENSMUST00000065523 5257 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Golgb1-203ENSMUST00000114812 11012 ntAPPRIS ALT2 TSL 5 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm43953-201ENSMUST00000203709 2867 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm26340-201ENSMUST00000102365 99 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm25785-201ENSMUST00000104129 125 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm24069-201ENSMUST00000104512 127 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Ccdc47-202ENSMUST00000106865 704 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Rpl35a-203ENSMUST00000115076 519 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm13137-201ENSMUST00000118035 345 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm14070-201ENSMUST00000120773 428 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm12101-201ENSMUST00000121590 390 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm12827-201ENSMUST00000132690 660 ntTSL 3 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Casp12-204ENSMUST00000151332 1065 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm24435-201ENSMUST00000157886 110 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm9285-201ENSMUST00000177691 697 ntBASIC6.04□□□□□ -1.44
Scrt1Q99M85 Gm37637-201ENSMUST00000195540 1256 ntBASIC6.04□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 103.7 ms