Protein–RNA interactions for Protein: Q8C9S8

Atg4a, Cysteine protease ATG4A, mousemouse

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4aQ8C9S8 AC135669.2-201ENSMUST00000215636 4958 ntBASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Ccdc127-201ENSMUST00000022063 9559 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 AC158537.1-201ENSMUST00000224637 1711 ntBASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Zfp790-202ENSMUST00000178162 3356 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Trp63-205ENSMUST00000115306 4691 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Gabpb2-205ENSMUST00000136139 8661 ntAPPRIS P2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Lilrb4a-201ENSMUST00000217706 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Zfhx3-204ENSMUST00000220518 17152 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Olfr538-202ENSMUST00000210973 1920 ntAPPRIS P1 TSL 5 BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Gm9144-201ENSMUST00000101625 1008 ntBASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Rps12-ps19-201ENSMUST00000119773 400 ntBASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Gm7113-201ENSMUST00000120477 958 ntBASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Gm15750-201ENSMUST00000120970 616 ntBASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Gm23888-201ENSMUST00000122690 253 ntBASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Gm13982-201ENSMUST00000138372 755 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Gm4997-201ENSMUST00000154056 360 ntBASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Gm27804-201ENSMUST00000185135 119 ntBASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Gm8506-201ENSMUST00000186661 829 ntBASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Gm43383-201ENSMUST00000195981 469 ntBASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Gm44227-201ENSMUST00000203576 241 ntBASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Gm29154-209ENSMUST00000213614 878 ntTSL 5 BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Mobp-206ENSMUST00000214943 435 ntAPPRIS P1 TSL 3 BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Gm18040-201ENSMUST00000217922 827 ntBASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Gm2754-201ENSMUST00000223383 589 ntBASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Zfp865-202ENSMUST00000076791 1129 ntBASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Elavl2-209ENSMUST00000107124 4127 ntAPPRIS ALT1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Slc22a6-201ENSMUST00000010250 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 C130075A20Rik-201ENSMUST00000198178 4176 ntBASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Kpna2-201ENSMUST00000018506 2054 ntAPPRIS P1 TSL 1 (best) BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Ktn1-202ENSMUST00000185343 3846 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Ktn1-205ENSMUST00000186627 3840 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Ktn1-213ENSMUST00000188330 3819 ntAPPRIS ALT2 TSL 5 BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Rp1-201ENSMUST00000027032 6869 ntTSL 1 (best) BASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Gm9839-201ENSMUST00000195252 1437 ntBASIC8.12□□□□□ -1.11
Atg4aQ8C9S8 Zc3h12c-202ENSMUST00000213645 6764 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Olfr1440-202ENSMUST00000213657 7588 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm43189-201ENSMUST00000196040 3069 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Olfr656-202ENSMUST00000215575 4091 ntAPPRIS ALT2 TSL 3 BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Thap6-201ENSMUST00000191860 3151 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Hspg2-201ENSMUST00000030547 14187 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm37040-201ENSMUST00000191740 1824 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm28874-201ENSMUST00000190917 3134 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Dlg1-206ENSMUST00000115205 4364 ntAPPRIS ALT2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm28856-201ENSMUST00000189150 2828 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm37347-201ENSMUST00000193969 3071 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm14513-201ENSMUST00000117403 123 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm12573-201ENSMUST00000118158 286 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm15149-201ENSMUST00000119370 360 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm13444-201ENSMUST00000119445 522 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Tex35-203ENSMUST00000119526 679 ntAPPRIS ALT2 TSL 5 BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Mgst1-204ENSMUST00000120302 559 ntAPPRIS P1 TSL 3 BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm3810-201ENSMUST00000122413 476 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm12525-201ENSMUST00000125412 554 ntTSL 2 BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm12531-201ENSMUST00000126099 487 ntTSL 3 BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 St8sia3os-203ENSMUST00000127716 667 ntTSL 1 (best) BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm22820-201ENSMUST00000157205 329 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm23756-201ENSMUST00000157582 114 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm9064-201ENSMUST00000163579 566 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Fabp12-204ENSMUST00000172126 779 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm27295-201ENSMUST00000184264 153 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm27970-201ENSMUST00000184854 407 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm28289-201ENSMUST00000189331 315 ntTSL 5 BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm29160-201ENSMUST00000190094 699 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm38256-201ENSMUST00000192097 950 ntTSL 5 BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 4930597L12Rik-201ENSMUST00000196286 911 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm17849-201ENSMUST00000219788 853 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 AC108437.1-201ENSMUST00000222170 776 ntTSL 5 BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 n-R5s41-201ENSMUST00000083025 119 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Prl2c3-201ENSMUST00000099805 857 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm26806-201ENSMUST00000180403 1519 ntTSL 5 BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gbp10-201ENSMUST00000065588 3528 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Uba1y-201ENSMUST00000115894 3981 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm28798-201ENSMUST00000186372 2161 ntTSL 5 BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Ampd3-201ENSMUST00000005829 4094 ntAPPRIS P2 TSL 1 (best) BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Olfr313-202ENSMUST00000217506 2612 ntAPPRIS P1 TSL 5 BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Clrn3-201ENSMUST00000053716 3305 ntAPPRIS P1 TSL 1 (best) BASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Gm37745-201ENSMUST00000193304 8163 ntBASIC8.11□□□□□ -1.11
Atg4aQ8C9S8 Anks4b-201ENSMUST00000033201 3900 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm20489-201ENSMUST00000117736 1350 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm37772-201ENSMUST00000191635 1394 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Slamf7-202ENSMUST00000192024 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Vmn1r44-210ENSMUST00000227747 1811 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm5084-202ENSMUST00000224064 3609 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Pdlim5-205ENSMUST00000170361 2010 ntTSL 5 BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm36981-201ENSMUST00000192340 4485 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 CT010453.1-201ENSMUST00000226795 2201 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Gm8177-201ENSMUST00000181591 1336 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Olfr15-202ENSMUST00000214238 6135 ntAPPRIS P1 TSL 5 BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Clasp1-204ENSMUST00000178710 7566 ntAPPRIS ALT2 TSL 5 BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Kcnj16-201ENSMUST00000106635 3671 ntAPPRIS P1 TSL 1 (best) BASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC8.1□□□□□ -1.11
Atg4aQ8C9S8 Ighv12-3-201ENSMUST00000103485 353 ntAPPRIS P1 BASIC8.1□□□□□ -1.11
Retrieved 100 of 76,532 protein–RNA pairs in 57.5 ms