Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm40604-201ENSMUST00000217765 655 ntTSL 5 BASIC9.57□□□□□ -0.88
Trim35Q8C006 AC159629.1-201ENSMUST00000220698 568 ntTSL 2 BASIC9.57□□□□□ -0.88
Trim35Q8C006 AC124732.4-201ENSMUST00000220930 1274 ntBASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm33016-201ENSMUST00000221224 677 ntTSL 3 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm46376-201ENSMUST00000222653 654 ntTSL 3 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Tnfrsf1b-201ENSMUST00000030336 3818 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Pdzk1ip1-201ENSMUST00000030488 1119 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Ctse-201ENSMUST00000073350 2126 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm9946-201ENSMUST00000008011 1025 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm23407-201ENSMUST00000082538 91 ntBASIC9.57□□□□□ -0.88
Trim35Q8C006 Iqcf5-201ENSMUST00000085113 551 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm10250-201ENSMUST00000090488 482 ntBASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm10291-201ENSMUST00000094175 999 ntBASIC9.57□□□□□ -0.88
Trim35Q8C006 Pcnp-201ENSMUST00000096021 608 ntTSL 5 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Psmf1-202ENSMUST00000109869 1384 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trim35Q8C006 5830473C10Rik-201ENSMUST00000094615 2308 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Tbc1d24-203ENSMUST00000097376 7265 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 4933436H12Rik-203ENSMUST00000207818 1466 ntTSL 5 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Ptger2-201ENSMUST00000046891 3684 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Robo4-202ENSMUST00000115046 3878 ntAPPRIS ALT2 TSL 2 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm5092-201ENSMUST00000188185 1675 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Mospd1-201ENSMUST00000023836 1763 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Gm30292-201ENSMUST00000194198 3000 ntTSL 3 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Cspp1-201ENSMUST00000071087 4355 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Tenm4-202ENSMUST00000107165 10930 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Klrc1-201ENSMUST00000032270 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Cse1l-201ENSMUST00000002790 3641 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Cc2d2a-201ENSMUST00000048150 5484 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Luzp1-203ENSMUST00000105849 7438 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trim35Q8C006 4931406P16Rik-201ENSMUST00000085592 5798 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Mroh2a-201ENSMUST00000061013 7526 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Dag1-202ENSMUST00000166905 4244 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Ebpl-201ENSMUST00000022494 10092 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 Tomm40l-202ENSMUST00000111326 2753 ntTSL 5 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Tmem170b-201ENSMUST00000129449 7168 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Trim35Q8C006 3930402G23Rik-201ENSMUST00000040608 3086 ntTSL 2 BASIC9.57□□□□□ -0.88
Trim35Q8C006 Sema5a-201ENSMUST00000067458 10809 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Trim35Q8C006 AC166358.5-201ENSMUST00000220706 1302 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 4930544M13Rik-202ENSMUST00000181553 1403 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim35Q8C006 Timeless-203ENSMUST00000105242 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim35Q8C006 Epn2-213ENSMUST00000179936 4452 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim35Q8C006 Pitpnm2os1-201ENSMUST00000161697 1618 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim35Q8C006 Uggt1-201ENSMUST00000046875 9033 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim35Q8C006 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm32335-201ENSMUST00000216896 2948 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim35Q8C006 Kif18b-201ENSMUST00000021311 3326 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim35Q8C006 Grik1-206ENSMUST00000211444 3528 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim35Q8C006 Cald1-202ENSMUST00000079391 4127 ntAPPRIS ALT2 TSL 5 BASIC9.56□□□□□ -0.88
Trim35Q8C006 Kif16b-203ENSMUST00000211861 4523 ntTSL 5 BASIC9.56□□□□□ -0.88
Trim35Q8C006 G3bp2-201ENSMUST00000113127 4182 ntAPPRIS ALT1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim35Q8C006 Ap2b1-205ENSMUST00000176430 3596 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim35Q8C006 Csf3r-201ENSMUST00000030673 3160 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trim35Q8C006 Snx25-207ENSMUST00000170416 3067 ntAPPRIS P2 TSL 5 BASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm20110-201ENSMUST00000218263 2095 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim35Q8C006 Ebf3-205ENSMUST00000209578 1863 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm44087-201ENSMUST00000204247 1770 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 2810403D21Rik-202ENSMUST00000124329 1660 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim35Q8C006 Gimap6-201ENSMUST00000053661 1594 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm13192-201ENSMUST00000101199 208 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Olfr281-201ENSMUST00000109163 1058 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm10443-201ENSMUST00000119024 210 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm15177-201ENSMUST00000120491 577 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Tpt1-ps3-201ENSMUST00000121046 519 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm13551-201ENSMUST00000121286 430 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm11384-201ENSMUST00000121376 303 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm13857-202ENSMUST00000141091 617 ntTSL 3 BASIC9.56□□□□□ -0.88
Trim35Q8C006 Slc1a3-208ENSMUST00000157065 728 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm22219-201ENSMUST00000157562 319 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm22604-201ENSMUST00000157604 311 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm23016-201ENSMUST00000158431 62 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm3355-201ENSMUST00000160079 487 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm17140-201ENSMUST00000169163 627 ntTSL 3 BASIC9.56□□□□□ -0.88
Trim35Q8C006 Vmn1r-ps32-201ENSMUST00000174389 956 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Mir3091-201ENSMUST00000175086 76 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm22448-201ENSMUST00000179254 107 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm3898-201ENSMUST00000180221 613 ntTSL 5 BASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm28136-206ENSMUST00000189800 1104 ntTSL 5 BASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm37065-202ENSMUST00000192000 568 ntTSL 3 BASIC9.56□□□□□ -0.88
Trim35Q8C006 Tmem89-202ENSMUST00000192852 945 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm20568-201ENSMUST00000197129 208 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm44922-201ENSMUST00000206690 90 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm45048-201ENSMUST00000207058 429 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm10988-201ENSMUST00000209150 1088 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm39147-202ENSMUST00000211730 882 ntTSL 5 BASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm7664-201ENSMUST00000221988 745 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Gm20102-201ENSMUST00000222445 220 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 CT485612.2-201ENSMUST00000223014 151 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 AC154849.1-201ENSMUST00000224873 960 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 AC154515.2-201ENSMUST00000226093 406 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 8030411F24Rik-201ENSMUST00000028933 602 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Trim35Q8C006 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC9.56□□□□□ -0.88
Trim35Q8C006 mt-Ti-201ENSMUST00000082393 69 ntBASIC9.56□□□□□ -0.88
Trim35Q8C006 Xlr5b-201ENSMUST00000097221 864 ntAPPRIS P1 TSL 5 BASIC9.56□□□□□ -0.88
Trim35Q8C006 Dclk1-201ENSMUST00000054237 7847 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms