Protein–RNA interactions for Protein: P97313

Prkdc, DNA-dependent protein kinase catalytic subunit, mousemouse

Predictions only

Length 4,128 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PrkdcP97313 Redrum-201ENSMUST00000181269 1774 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 Gm8501-201ENSMUST00000117684 432 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 Gm8855-201ENSMUST00000118888 878 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 Gm11659-201ENSMUST00000137561 466 ntTSL 3 BASIC4.46□□□□□ -1.7
PrkdcP97313 Gm25655-201ENSMUST00000158465 290 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 Gm21917-201ENSMUST00000177831 666 ntTSL 2 BASIC4.46□□□□□ -1.7
PrkdcP97313 4930403P22Rik-201ENSMUST00000192234 713 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 Gm20203-201ENSMUST00000192352 332 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 Gm45554-203ENSMUST00000211410 2137 ntTSL 5 BASIC4.46□□□□□ -1.7
PrkdcP97313 AC164164.2-201ENSMUST00000221809 785 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 AC154806.5-205ENSMUST00000228828 411 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 Olfr1026-201ENSMUST00000056718 965 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PrkdcP97313 Olfr1359-201ENSMUST00000077843 991 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PrkdcP97313 Gm45537-201ENSMUST00000211539 2708 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 Madd-211ENSMUST00000111373 5641 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PrkdcP97313 Pp2d1-201ENSMUST00000056198 2476 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 BB031773-201ENSMUST00000148892 3655 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 Olfr972-202ENSMUST00000215303 1641 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
PrkdcP97313 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 Olfr558-201ENSMUST00000094124 3041 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 Lipk-203ENSMUST00000225505 2083 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PrkdcP97313 Ryr1-208ENSMUST00000214374 15300 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
PrkdcP97313 Adarb2-202ENSMUST00000123187 4002 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 D030045P18Rik-203ENSMUST00000214947 1938 ntTSL 5 BASIC4.46□□□□□ -1.7
PrkdcP97313 Usp29-201ENSMUST00000054055 2610 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PrkdcP97313 Olfr1351-202ENSMUST00000216030 2489 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
PrkdcP97313 Wee2-201ENSMUST00000038907 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 Fam160a1-201ENSMUST00000094148 4280 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
PrkdcP97313 Sema6a-210ENSMUST00000156422 3291 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
PrkdcP97313 Gm22778-201ENSMUST00000104090 128 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 Gm14356-201ENSMUST00000118322 869 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 Gm15568-201ENSMUST00000118589 1213 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 Gm11366-201ENSMUST00000119279 429 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC4.46□□□□□ -1.7
PrkdcP97313 Gm44330-201ENSMUST00000200106 143 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 Gm43456-201ENSMUST00000202519 457 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 Gm44705-201ENSMUST00000206719 339 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 Gm34853-201ENSMUST00000211662 509 ntTSL 5 BASIC4.46□□□□□ -1.7
PrkdcP97313 AC154556.1-201ENSMUST00000224587 885 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 AC123665.6-201ENSMUST00000228568 538 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 Tas2r116-201ENSMUST00000032315 918 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PrkdcP97313 Tdrd1-203ENSMUST00000111606 4914 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 Ehmt1-203ENSMUST00000102938 4680 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 Hspa12a-201ENSMUST00000066285 5733 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 Gm20075-201ENSMUST00000220449 2161 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
PrkdcP97313 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 Scn3b-201ENSMUST00000049941 4150 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 Ppip5k1-201ENSMUST00000052029 5533 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
PrkdcP97313 Gm4954-201ENSMUST00000135069 1601 ntBASIC4.46□□□□□ -1.7
PrkdcP97313 Olfr731-203ENSMUST00000214152 5572 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PrkdcP97313 Lcp1-206ENSMUST00000131802 3594 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PrkdcP97313 Phf24-203ENSMUST00000107976 6538 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Gm8761-201ENSMUST00000121507 955 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Gm25178-201ENSMUST00000122633 325 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Mageb6-ps-201ENSMUST00000126612 1032 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Platr28-201ENSMUST00000133824 1294 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Gm25152-201ENSMUST00000157117 114 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Gm17086-201ENSMUST00000171346 484 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Gm26731-201ENSMUST00000180683 543 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Gm21728-201ENSMUST00000188442 695 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Gm21889-201ENSMUST00000188487 695 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Gm21920-201ENSMUST00000190042 695 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Gm28171-201ENSMUST00000190100 1226 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Olfr826-201ENSMUST00000078322 942 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PrkdcP97313 Olfr441-201ENSMUST00000095954 933 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
PrkdcP97313 Defa31-201ENSMUST00000098896 377 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 CR974429.2-201ENSMUST00000221883 1696 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Gbp7-202ENSMUST00000171263 2497 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Epha7-202ENSMUST00000080934 2880 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Plekhm1-201ENSMUST00000041272 5968 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Shank2-202ENSMUST00000105900 8169 ntTSL 5 BASIC4.45□□□□□ -1.7
PrkdcP97313 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 CT009757.6-201ENSMUST00000220661 2312 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Gm43707-201ENSMUST00000196451 3187 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Cadm2-201ENSMUST00000114292 9564 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Rnf2-204ENSMUST00000187048 3201 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Glyat-201ENSMUST00000044976 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Gm44436-201ENSMUST00000204200 1494 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Chd7-202ENSMUST00000051558 10216 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PrkdcP97313 Myh1-201ENSMUST00000018637 5938 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PrkdcP97313 Gm16089-201ENSMUST00000117679 336 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Gm14520-201ENSMUST00000119258 387 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Gm12396-201ENSMUST00000121600 306 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Gm12256-201ENSMUST00000132394 446 ntTSL 3 BASIC4.45□□□□□ -1.7
PrkdcP97313 Gm2026-203ENSMUST00000174416 532 ntTSL 3 BASIC4.45□□□□□ -1.7
PrkdcP97313 Mir3080-201ENSMUST00000175010 79 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 1700006H21Rik-201ENSMUST00000188490 627 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 1700052I22Rik-201ENSMUST00000190431 379 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Gm42720-201ENSMUST00000196813 300 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Gm44432-201ENSMUST00000203342 938 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Defb15-201ENSMUST00000062586 345 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Gm25147-201ENSMUST00000083030 105 ntBASIC4.45□□□□□ -1.7
PrkdcP97313 Col6a4-201ENSMUST00000121963 7371 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
PrkdcP97313 Gpr101-201ENSMUST00000057645 5410 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 9830004L10Rik-201ENSMUST00000185548 2177 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Gm38003-201ENSMUST00000191968 1504 ntTSL 5 BASIC4.45□□□□□ -1.7
PrkdcP97313 Gm14635-202ENSMUST00000146535 1409 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Dach2-205ENSMUST00000113382 5155 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
PrkdcP97313 Zmym3-203ENSMUST00000117901 5178 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms