Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Gm43351-201ENSMUST00000198737 326 ntTSL 5 BASIC7.94□□□□□ -1.14
Col1a1P11087 Gm44823-201ENSMUST00000204775 1107 ntBASIC7.94□□□□□ -1.14
Col1a1P11087 Gm44705-201ENSMUST00000206719 339 ntBASIC7.94□□□□□ -1.14
Col1a1P11087 Gm18103-201ENSMUST00000216621 779 ntBASIC7.94□□□□□ -1.14
Col1a1P11087 n-R5s58-201ENSMUST00000093682 119 ntBASIC7.94□□□□□ -1.14
Col1a1P11087 Satb1-213ENSMUST00000169480 6194 ntAPPRIS P2 TSL 5 BASIC7.93□□□□□ -1.14
Col1a1P11087 Mars2-201ENSMUST00000061334 11294 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Col1a1P11087 Kcnj15-203ENSMUST00000113855 5128 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Csrnp3-201ENSMUST00000053910 4495 ntAPPRIS P3 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Atp13a4-202ENSMUST00000057018 4054 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Gm5177-202ENSMUST00000183337 3785 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Smyd3-204ENSMUST00000128302 6871 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Gm42685-201ENSMUST00000200378 2390 ntBASIC7.93□□□□□ -1.14
Col1a1P11087 Pja2-204ENSMUST00000172818 4740 ntAPPRIS P4 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Smpd4-204ENSMUST00000163476 4532 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Slc6a18-202ENSMUST00000109679 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Tgfbr1-203ENSMUST00000107725 1713 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Gprasp1-206ENSMUST00000166554 4993 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Gmeb1-203ENSMUST00000105965 4632 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Zfp473-202ENSMUST00000118162 3091 ntAPPRIS ALT2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Cd209a-201ENSMUST00000012847 1482 ntAPPRIS P2 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Gm38414-201ENSMUST00000209819 1488 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Fam114a1-201ENSMUST00000031080 2938 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Gm2762-207ENSMUST00000202739 2665 ntBASIC7.93□□□□□ -1.14
Col1a1P11087 Gm10773-201ENSMUST00000218071 3935 ntBASIC7.93□□□□□ -1.14
Col1a1P11087 Slitrk2-202ENSMUST00000166241 7769 ntAPPRIS P1 TSL 2 BASIC7.93□□□□□ -1.14
Col1a1P11087 Vmn2r15-201ENSMUST00000167133 2568 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Col1a1P11087 Gm14295-201ENSMUST00000118012 1213 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 4930586N03Rik-201ENSMUST00000122940 881 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Gm13291-201ENSMUST00000143527 655 ntTSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Gm20401-201ENSMUST00000173717 212 ntBASIC7.93□□□□□ -1.14
Col1a1P11087 Ighv2-6-201ENSMUST00000179657 350 ntAPPRIS P1 BASIC7.93□□□□□ -1.14
Col1a1P11087 Gm7952-201ENSMUST00000180540 984 ntBASIC7.93□□□□□ -1.14
Col1a1P11087 Gm29519-201ENSMUST00000186994 398 ntBASIC7.93□□□□□ -1.14
Col1a1P11087 Gm37349-201ENSMUST00000194205 624 ntBASIC7.93□□□□□ -1.14
Col1a1P11087 Gm43354-201ENSMUST00000196862 346 ntBASIC7.93□□□□□ -1.14
Col1a1P11087 Gm44360-201ENSMUST00000200081 82 ntBASIC7.93□□□□□ -1.14
Col1a1P11087 Gm10037-201ENSMUST00000060609 315 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Col1a1P11087 1700013H16Rik-201ENSMUST00000067940 1224 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Calcoco2-202ENSMUST00000097162 968 ntAPPRIS ALT2 TSL 5 BASIC7.93□□□□□ -1.14
Col1a1P11087 Dclre1b-204ENSMUST00000106834 3705 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Col1a1P11087 Gm14085-201ENSMUST00000110521 3740 ntAPPRIS P1 TSL 5 BASIC7.93□□□□□ -1.14
Col1a1P11087 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC7.93□□□□□ -1.14
Col1a1P11087 Rtel1-201ENSMUST00000048608 4135 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 Abi1-202ENSMUST00000091394 3023 ntAPPRIS ALT1 TSL 5 BASIC7.92□□□□□ -1.14
Col1a1P11087 Efcab5-201ENSMUST00000108400 4654 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col1a1P11087 Slfn4-202ENSMUST00000167596 3703 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 Rlim-202ENSMUST00000121153 7439 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 F5-201ENSMUST00000086040 7430 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 Efhb-201ENSMUST00000024725 2661 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 Ptprj-201ENSMUST00000111493 7124 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Col1a1P11087 Gm26807-201ENSMUST00000181132 4363 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 Itch-201ENSMUST00000029126 5159 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 Gm13490-201ENSMUST00000143870 2409 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 Cntrl-203ENSMUST00000113032 7085 ntAPPRIS P2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 Gpatch8-206ENSMUST00000143842 6871 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col1a1P11087 4930480E11Rik-201ENSMUST00000035626 1486 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col1a1P11087 Mageb18-202ENSMUST00000113955 2163 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col1a1P11087 Ikbkg-201ENSMUST00000004330 6918 ntAPPRIS ALT2 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 Gm5524-201ENSMUST00000185409 2002 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 C330024D21Rik-202ENSMUST00000202634 2020 ntTSL 2 BASIC7.92□□□□□ -1.14
Col1a1P11087 Pfkfb3-201ENSMUST00000028114 4712 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 Myo16-202ENSMUST00000207204 6719 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 Bdnf-207ENSMUST00000111047 4042 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 Slc22a19-201ENSMUST00000025666 1998 ntAPPRIS P1 TSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 Bloc1s6os-201ENSMUST00000150154 696 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 Gm16226-201ENSMUST00000159950 760 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 Gm20491-201ENSMUST00000173765 1241 ntBASIC7.92□□□□□ -1.14
Col1a1P11087 Fam47e-207ENSMUST00000176621 746 ntTSL 3 BASIC7.92□□□□□ -1.14
Col1a1P11087 Gm37463-201ENSMUST00000193819 796 ntBASIC7.92□□□□□ -1.14
Col1a1P11087 Gm5717-201ENSMUST00000198243 1062 ntBASIC7.92□□□□□ -1.14
Col1a1P11087 Fxyd1-207ENSMUST00000205778 438 ntAPPRIS P1 TSL 3 BASIC7.92□□□□□ -1.14
Col1a1P11087 Gm18805-201ENSMUST00000206872 655 ntBASIC7.92□□□□□ -1.14
Col1a1P11087 4921513I08Rik-201ENSMUST00000206993 866 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 AC211878.6-201ENSMUST00000221896 358 ntBASIC7.92□□□□□ -1.14
Col1a1P11087 Olfr467-201ENSMUST00000084756 927 ntBASIC7.92□□□□□ -1.14
Col1a1P11087 Gm13083-201ENSMUST00000105773 2464 ntAPPRIS P1 TSL 5 BASIC7.92□□□□□ -1.14
Col1a1P11087 Kmo-202ENSMUST00000097458 3672 ntAPPRIS ALT2 TSL 5 BASIC7.92□□□□□ -1.14
Col1a1P11087 A330076H08Rik-202ENSMUST00000207694 1836 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 Gm12292-201ENSMUST00000122911 2433 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 Olfr1333-202ENSMUST00000214477 2996 ntAPPRIS ALT2 TSL 3 BASIC7.92□□□□□ -1.14
Col1a1P11087 Gm15462-201ENSMUST00000133653 4580 ntTSL 1 (best) BASIC7.92□□□□□ -1.14
Col1a1P11087 Vmn1r26-202ENSMUST00000228040 4546 ntAPPRIS P1 BASIC7.92□□□□□ -1.14
Col1a1P11087 Pard3-220ENSMUST00000162456 3204 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 D330045A20Rik-201ENSMUST00000046763 3737 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Kif26b-202ENSMUST00000161017 13749 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Clrn1-202ENSMUST00000055636 3083 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 D030047H15Rik-201ENSMUST00000148318 2536 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Ctnnd1-224ENSMUST00000111698 5850 ntTSL 5 BASIC7.91□□□□□ -1.14
Col1a1P11087 Apobec3-203ENSMUST00000165537 2360 ntAPPRIS P3 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Zfp825-202ENSMUST00000202645 1406 ntAPPRIS P2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Gjc1-203ENSMUST00000107075 2314 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 4933404O12Rik-202ENSMUST00000181190 4058 ntTSL 5 BASIC7.91□□□□□ -1.14
Col1a1P11087 Bbx-203ENSMUST00000089404 4024 ntAPPRIS ALT2 TSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Medag-202ENSMUST00000201083 2669 ntTSL 1 (best) BASIC7.91□□□□□ -1.14
Col1a1P11087 Tcf24-201ENSMUST00000097824 2639 ntBASIC7.91□□□□□ -1.14
Col1a1P11087 Olfr1264-202ENSMUST00000216616 4311 ntAPPRIS P1 TSL 5 BASIC7.91□□□□□ -1.14
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms