Protein–RNA interactions for Protein: G3UXB3

Nkx1-1, NK1 homeobox 1, mousemouse

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx1-1G3UXB3 Slc11a2-205ENSMUST00000138843 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx1-1G3UXB3 Golm1-201ENSMUST00000022039 3954 ntAPPRIS P1 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx1-1G3UXB3 Sptan1-205ENSMUST00000113719 8018 ntTSL 5 BASIC10.23□□□□□ -0.77
Nkx1-1G3UXB3 Phtf1os-201ENSMUST00000160110 4046 ntBASIC10.23□□□□□ -0.77
Nkx1-1G3UXB3 Prc1-202ENSMUST00000163812 3026 ntAPPRIS P3 TSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx1-1G3UXB3 Psg19-203ENSMUST00000182853 1518 ntTSL 1 (best) BASIC10.23□□□□□ -0.77
Nkx1-1G3UXB3 Sag-209ENSMUST00000177757 1584 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 AC140393.1-201ENSMUST00000227959 1581 ntBASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Hmgb2-201ENSMUST00000067925 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Ube2l3-201ENSMUST00000090192 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Fndc7-207ENSMUST00000180063 4820 ntAPPRIS ALT2 TSL 5 BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Zfp964-203ENSMUST00000204285 4333 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm40603-202ENSMUST00000219975 1642 ntTSL 5 BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Dlgap4-206ENSMUST00000109568 3256 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Inpp5d-210ENSMUST00000169754 4937 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Adat1-202ENSMUST00000120457 1677 ntTSL 5 BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Pcdhb2-201ENSMUST00000056522 2813 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 AC164426.2-201ENSMUST00000225993 2492 ntBASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm24071-201ENSMUST00000104520 132 ntBASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm12713-201ENSMUST00000118404 764 ntBASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Atp5k-202ENSMUST00000118632 272 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm15553-201ENSMUST00000118757 430 ntBASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm15838-201ENSMUST00000161575 180 ntBASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Spink10-205ENSMUST00000162365 1076 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm17020-201ENSMUST00000172274 274 ntBASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm20765-201ENSMUST00000177792 795 ntAPPRIS P2 BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm21312-201ENSMUST00000179258 795 ntAPPRIS P2 BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm27851-201ENSMUST00000183529 63 ntBASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm27660-201ENSMUST00000184028 208 ntBASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm9127-201ENSMUST00000188041 985 ntBASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm43067-201ENSMUST00000201580 445 ntTSL 3 BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm44162-201ENSMUST00000203543 544 ntBASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm7850-201ENSMUST00000212909 712 ntBASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 AC159282.1-206ENSMUST00000219268 708 ntTSL 3 BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm7240-202ENSMUST00000221961 353 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Ccl17-201ENSMUST00000034232 514 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Atp5k-201ENSMUST00000049628 371 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm25973-201ENSMUST00000083717 127 ntBASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Defb23-201ENSMUST00000099206 624 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Ncam1-201ENSMUST00000114476 2567 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Ccdc24-206ENSMUST00000164853 3990 ntTSL 2 BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Txnrd1-201ENSMUST00000020484 3325 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Fmo4-202ENSMUST00000111525 2683 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Zbtb21-201ENSMUST00000052089 5410 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm15947-201ENSMUST00000161395 2742 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gmfb-202ENSMUST00000111817 4171 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gmfb-201ENSMUST00000079314 4171 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm17076-201ENSMUST00000165185 1401 ntBASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm17093-201ENSMUST00000170427 1404 ntAPPRIS P1 TSL 5 BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm28333-201ENSMUST00000186034 2168 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm28704-201ENSMUST00000186589 2169 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm29636-201ENSMUST00000188149 2169 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm28839-201ENSMUST00000189579 2171 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm29612-201ENSMUST00000191490 2168 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Cd2bp2-203ENSMUST00000205316 2912 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Tank-204ENSMUST00000112501 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm44950-201ENSMUST00000206403 2296 ntBASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Adar-205ENSMUST00000121094 2321 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm42967-201ENSMUST00000198647 2312 ntBASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Thsd7b-202ENSMUST00000073527 6213 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Rnf41-201ENSMUST00000096386 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Tsc1-204ENSMUST00000113870 7595 ntAPPRIS P3 TSL 1 (best) BASIC10.22□□□□□ -0.77
Nkx1-1G3UXB3 Lrrc14b-201ENSMUST00000022064 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 4632404M16Rik-201ENSMUST00000197326 2882 ntBASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Olfr221-204ENSMUST00000216188 2871 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Gm45153-201ENSMUST00000205957 1901 ntBASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Akap3-203ENSMUST00000202878 3023 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Mcm3-201ENSMUST00000053266 3031 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Etv1-203ENSMUST00000160244 2032 ntTSL 5 BASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Olfml2b-201ENSMUST00000046792 3095 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Acp1-201ENSMUST00000062740 3066 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Gm42141-201ENSMUST00000196534 2172 ntBASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Gm40289-201ENSMUST00000201470 2268 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Gm12245-201ENSMUST00000117266 357 ntBASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 H3f3a-ps1-201ENSMUST00000119546 410 ntBASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Gm15763-201ENSMUST00000120136 403 ntBASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Gm12042-201ENSMUST00000120479 301 ntBASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Gm14926-201ENSMUST00000120650 508 ntBASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Gm11200-201ENSMUST00000121698 448 ntBASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Gm12569-202ENSMUST00000126189 796 ntTSL 5 BASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Gm25989-201ENSMUST00000158761 133 ntBASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Gm24899-201ENSMUST00000158892 73 ntBASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Gm8715-201ENSMUST00000162728 531 ntBASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Gm6434-201ENSMUST00000163316 372 ntBASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Gm3030-201ENSMUST00000163410 516 ntBASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Hist2h2bb-201ENSMUST00000177113 381 ntAPPRIS P1 BASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Gm5527-201ENSMUST00000179821 642 ntBASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Gm28478-201ENSMUST00000185802 183 ntBASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 4931428L18Rik-203ENSMUST00000187659 423 ntAPPRIS ALT2 TSL 1 (best) BASIC10.21□□□□□ -0.77
Nkx1-1G3UXB3 Gm5694-201ENSMUST00000195648 641 ntBASIC10.21□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 99.6 ms