Protein–RNA interactions for Protein: Q9Z0Y9

Nr1h3, Oxysterols receptor LXR-alpha, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h3Q9Z0Y9 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nr1h3Q9Z0Y9 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nr1h3Q9Z0Y9 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nr1h3Q9Z0Y9 Gm13836-201ENSMUST00000121159 501 ntBASIC19.8■□□□□ 0.76
Nr1h3Q9Z0Y9 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nr1h3Q9Z0Y9 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
Nr1h3Q9Z0Y9 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC19.8■□□□□ 0.76
Nr1h3Q9Z0Y9 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
Nr1h3Q9Z0Y9 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Nr1h3Q9Z0Y9 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Nr1h3Q9Z0Y9 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1h3Q9Z0Y9 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1h3Q9Z0Y9 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1h3Q9Z0Y9 Gm11927-201ENSMUST00000118472 759 ntBASIC19.79■□□□□ 0.76
Nr1h3Q9Z0Y9 Gm7977-201ENSMUST00000193787 748 ntBASIC19.79■□□□□ 0.76
Nr1h3Q9Z0Y9 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1h3Q9Z0Y9 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.79■□□□□ 0.76
Nr1h3Q9Z0Y9 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1h3Q9Z0Y9 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1h3Q9Z0Y9 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1h3Q9Z0Y9 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Nr1h3Q9Z0Y9 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1h3Q9Z0Y9 Cnih3-202ENSMUST00000161880 1995 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1h3Q9Z0Y9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1h3Q9Z0Y9 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC19.79■□□□□ 0.76
Nr1h3Q9Z0Y9 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Nr1h3Q9Z0Y9 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Minpp1-201ENSMUST00000025827 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Nr1h3Q9Z0Y9 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1h3Q9Z0Y9 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1h3Q9Z0Y9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1h3Q9Z0Y9 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1h3Q9Z0Y9 CT010444.2-201ENSMUST00000217877 1629 ntBASIC19.77■□□□□ 0.76
Nr1h3Q9Z0Y9 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1h3Q9Z0Y9 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC19.77■□□□□ 0.76
Nr1h3Q9Z0Y9 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1h3Q9Z0Y9 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1h3Q9Z0Y9 Iscu-202ENSMUST00000112311 1395 ntTSL 2 BASIC19.77■□□□□ 0.76
Nr1h3Q9Z0Y9 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1h3Q9Z0Y9 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1h3Q9Z0Y9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1h3Q9Z0Y9 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1h3Q9Z0Y9 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1h3Q9Z0Y9 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1h3Q9Z0Y9 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Nr1h3Q9Z0Y9 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nr1h3Q9Z0Y9 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Nr1h3Q9Z0Y9 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr1h3Q9Z0Y9 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr1h3Q9Z0Y9 Cdk11b-202ENSMUST00000105598 2673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr1h3Q9Z0Y9 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr1h3Q9Z0Y9 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Nr1h3Q9Z0Y9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC19.76■□□□□ 0.75
Nr1h3Q9Z0Y9 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Nr1h3Q9Z0Y9 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Nr1h3Q9Z0Y9 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.76■□□□□ 0.75
Nr1h3Q9Z0Y9 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC19.76■□□□□ 0.75
Nr1h3Q9Z0Y9 Rab1a-203ENSMUST00000109602 2626 ntTSL 5 BASIC19.76■□□□□ 0.75
Nr1h3Q9Z0Y9 Gm5784-201ENSMUST00000179344 2478 ntBASIC19.76■□□□□ 0.75
Nr1h3Q9Z0Y9 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1h3Q9Z0Y9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1h3Q9Z0Y9 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1h3Q9Z0Y9 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.75■□□□□ 0.75
Nr1h3Q9Z0Y9 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.75■□□□□ 0.75
Nr1h3Q9Z0Y9 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Nr1h3Q9Z0Y9 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1h3Q9Z0Y9 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1h3Q9Z0Y9 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Nr1h3Q9Z0Y9 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1h3Q9Z0Y9 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1h3Q9Z0Y9 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1h3Q9Z0Y9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1h3Q9Z0Y9 Zfp706-201ENSMUST00000078976 4417 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Nr1h3Q9Z0Y9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Nr1h3Q9Z0Y9 Rcc1-202ENSMUST00000084250 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr1h3Q9Z0Y9 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr1h3Q9Z0Y9 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr1h3Q9Z0Y9 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC19.74■□□□□ 0.75
Nr1h3Q9Z0Y9 Krtap5-1-202ENSMUST00000188274 742 ntBASIC19.74■□□□□ 0.75
Nr1h3Q9Z0Y9 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Nr1h3Q9Z0Y9 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
Nr1h3Q9Z0Y9 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Nr1h3Q9Z0Y9 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 41.9 ms