Protein–RNA interactions for Protein: Q9Z0S7

Cldn9, Claudin-9, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn9Q9Z0S7 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 AC121961.1-201ENSMUST00000218594 1779 ntBASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Cldn9Q9Z0S7 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn9Q9Z0S7 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Cldn9Q9Z0S7 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.56■□□□□ 0.4
Cldn9Q9Z0S7 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn9Q9Z0S7 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn9Q9Z0S7 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn9Q9Z0S7 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn9Q9Z0S7 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn9Q9Z0S7 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn9Q9Z0S7 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn9Q9Z0S7 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Cldn9Q9Z0S7 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Cldn9Q9Z0S7 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn9Q9Z0S7 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn9Q9Z0S7 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Cldn9Q9Z0S7 Gm43672-201ENSMUST00000199072 1731 ntBASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 Mrm1-201ENSMUST00000018549 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 B3galnt2-207ENSMUST00000221974 2439 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Cldn9Q9Z0S7 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn9Q9Z0S7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC17.54■□□□□ 0.4
Cldn9Q9Z0S7 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn9Q9Z0S7 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn9Q9Z0S7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn9Q9Z0S7 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn9Q9Z0S7 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cldn9Q9Z0S7 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn9Q9Z0S7 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC17.54■□□□□ 0.4
Cldn9Q9Z0S7 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC17.54■□□□□ 0.4
Cldn9Q9Z0S7 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn9Q9Z0S7 Hist1h2ao-201ENSMUST00000091745 480 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Cldn9Q9Z0S7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn9Q9Z0S7 Lrch2-201ENSMUST00000112819 4892 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Cldn9Q9Z0S7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn9Q9Z0S7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn9Q9Z0S7 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Cldn9Q9Z0S7 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn9Q9Z0S7 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn9Q9Z0S7 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn9Q9Z0S7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.53■□□□□ 0.4
Cldn9Q9Z0S7 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cldn9Q9Z0S7 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn9Q9Z0S7 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
Cldn9Q9Z0S7 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn9Q9Z0S7 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cldn9Q9Z0S7 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn9Q9Z0S7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn9Q9Z0S7 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn9Q9Z0S7 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn9Q9Z0S7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC17.52■□□□□ 0.4
Cldn9Q9Z0S7 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn9Q9Z0S7 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn9Q9Z0S7 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC17.52■□□□□ 0.4
Cldn9Q9Z0S7 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn9Q9Z0S7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn9Q9Z0S7 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.52■□□□□ 0.4
Cldn9Q9Z0S7 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn9Q9Z0S7 Gm22325-201ENSMUST00000158904 308 ntBASIC17.52■□□□□ 0.4
Cldn9Q9Z0S7 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC17.52■□□□□ 0.4
Cldn9Q9Z0S7 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cldn9Q9Z0S7 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
Cldn9Q9Z0S7 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn9Q9Z0S7 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn9Q9Z0S7 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.39
Cldn9Q9Z0S7 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cldn9Q9Z0S7 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms