Protein–RNA interactions for Protein: Q9Z0H8

Clip2, CAP-Gly domain-containing linker protein 2, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip2Q9Z0H8 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clip2Q9Z0H8 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Clip2Q9Z0H8 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clip2Q9Z0H8 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC21.22■□□□□ 0.99
Clip2Q9Z0H8 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clip2Q9Z0H8 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clip2Q9Z0H8 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clip2Q9Z0H8 Pwwp2b-201ENSMUST00000093993 3057 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Clip2Q9Z0H8 Keap1-204ENSMUST00000193982 2163 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clip2Q9Z0H8 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC21.22■□□□□ 0.99
Clip2Q9Z0H8 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Clip2Q9Z0H8 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC21.22■□□□□ 0.99
Clip2Q9Z0H8 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clip2Q9Z0H8 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clip2Q9Z0H8 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clip2Q9Z0H8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC21.22■□□□□ 0.99
Clip2Q9Z0H8 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clip2Q9Z0H8 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Clip2Q9Z0H8 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clip2Q9Z0H8 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Clip2Q9Z0H8 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clip2Q9Z0H8 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
Clip2Q9Z0H8 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC21.21■□□□□ 0.99
Clip2Q9Z0H8 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clip2Q9Z0H8 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC21.21■□□□□ 0.99
Clip2Q9Z0H8 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Clip2Q9Z0H8 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC21.2■□□□□ 0.98
Clip2Q9Z0H8 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC21.2■□□□□ 0.98
Clip2Q9Z0H8 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clip2Q9Z0H8 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clip2Q9Z0H8 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.2■□□□□ 0.98
Clip2Q9Z0H8 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clip2Q9Z0H8 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
Clip2Q9Z0H8 AC163280.1-201ENSMUST00000228194 1100 ntBASIC21.2■□□□□ 0.98
Clip2Q9Z0H8 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Clip2Q9Z0H8 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Clip2Q9Z0H8 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clip2Q9Z0H8 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Clip2Q9Z0H8 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clip2Q9Z0H8 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Clip2Q9Z0H8 Ppp2r1b-209ENSMUST00000176349 1890 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Clip2Q9Z0H8 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clip2Q9Z0H8 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clip2Q9Z0H8 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clip2Q9Z0H8 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clip2Q9Z0H8 Brsk2-201ENSMUST00000018971 4049 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clip2Q9Z0H8 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clip2Q9Z0H8 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clip2Q9Z0H8 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clip2Q9Z0H8 Zfp783-201ENSMUST00000095946 670 ntBASIC21.19■□□□□ 0.98
Clip2Q9Z0H8 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
Clip2Q9Z0H8 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clip2Q9Z0H8 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Clip2Q9Z0H8 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Clip2Q9Z0H8 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clip2Q9Z0H8 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Clip2Q9Z0H8 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clip2Q9Z0H8 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clip2Q9Z0H8 Gm13158-201ENSMUST00000122007 736 ntBASIC21.18■□□□□ 0.98
Clip2Q9Z0H8 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clip2Q9Z0H8 Gm18666-201ENSMUST00000190039 958 ntBASIC21.18■□□□□ 0.98
Clip2Q9Z0H8 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clip2Q9Z0H8 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clip2Q9Z0H8 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clip2Q9Z0H8 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clip2Q9Z0H8 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clip2Q9Z0H8 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Clip2Q9Z0H8 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clip2Q9Z0H8 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clip2Q9Z0H8 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC21.17■□□□□ 0.98
Clip2Q9Z0H8 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Clip2Q9Z0H8 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC21.17■□□□□ 0.98
Clip2Q9Z0H8 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC21.17■□□□□ 0.98
Clip2Q9Z0H8 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clip2Q9Z0H8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clip2Q9Z0H8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC21.17■□□□□ 0.98
Clip2Q9Z0H8 Gm45906-201ENSMUST00000208911 1430 ntBASIC21.17■□□□□ 0.98
Clip2Q9Z0H8 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clip2Q9Z0H8 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clip2Q9Z0H8 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Clip2Q9Z0H8 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Clip2Q9Z0H8 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC21.16■□□□□ 0.98
Clip2Q9Z0H8 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC21.16■□□□□ 0.98
Clip2Q9Z0H8 Nrn1-203ENSMUST00000223611 1443 ntBASIC21.16■□□□□ 0.98
Clip2Q9Z0H8 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clip2Q9Z0H8 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.16■□□□□ 0.98
Clip2Q9Z0H8 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clip2Q9Z0H8 Mtag2-201ENSMUST00000058665 714 ntBASIC21.16■□□□□ 0.98
Clip2Q9Z0H8 Gm10812-201ENSMUST00000099864 546 ntBASIC21.16■□□□□ 0.98
Clip2Q9Z0H8 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
Clip2Q9Z0H8 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC21.16■□□□□ 0.98
Clip2Q9Z0H8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC21.15■□□□□ 0.98
Clip2Q9Z0H8 Golph3-205ENSMUST00000228671 2842 ntBASIC21.15■□□□□ 0.98
Clip2Q9Z0H8 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC21.15■□□□□ 0.98
Clip2Q9Z0H8 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clip2Q9Z0H8 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Clip2Q9Z0H8 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clip2Q9Z0H8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clip2Q9Z0H8 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Clip2Q9Z0H8 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC21.15■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms