Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcb1Q9Z0H3 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcb1Q9Z0H3 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC18.94■□□□□ 0.62
Smarcb1Q9Z0H3 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcb1Q9Z0H3 Vps26a-201ENSMUST00000092473 2712 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Smarcb1Q9Z0H3 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC18.93■□□□□ 0.62
Smarcb1Q9Z0H3 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcb1Q9Z0H3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcb1Q9Z0H3 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcb1Q9Z0H3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcb1Q9Z0H3 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcb1Q9Z0H3 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcb1Q9Z0H3 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcb1Q9Z0H3 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC18.93■□□□□ 0.62
Smarcb1Q9Z0H3 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcb1Q9Z0H3 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
Smarcb1Q9Z0H3 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcb1Q9Z0H3 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.93■□□□□ 0.62
Smarcb1Q9Z0H3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcb1Q9Z0H3 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcb1Q9Z0H3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Smarcb1Q9Z0H3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcb1Q9Z0H3 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcb1Q9Z0H3 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcb1Q9Z0H3 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcb1Q9Z0H3 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcb1Q9Z0H3 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcb1Q9Z0H3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcb1Q9Z0H3 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Smarcb1Q9Z0H3 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcb1Q9Z0H3 Mylip-201ENSMUST00000038275 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcb1Q9Z0H3 Gm44544-201ENSMUST00000207052 1844 ntBASIC18.92■□□□□ 0.62
Smarcb1Q9Z0H3 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcb1Q9Z0H3 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Smarcb1Q9Z0H3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcb1Q9Z0H3 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcb1Q9Z0H3 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcb1Q9Z0H3 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Smarcb1Q9Z0H3 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC18.91■□□□□ 0.62
Smarcb1Q9Z0H3 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcb1Q9Z0H3 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Smarcb1Q9Z0H3 Rncr4-201ENSMUST00000194541 2234 ntBASIC18.91■□□□□ 0.62
Smarcb1Q9Z0H3 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcb1Q9Z0H3 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
Smarcb1Q9Z0H3 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcb1Q9Z0H3 Uck1-201ENSMUST00000002625 2005 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcb1Q9Z0H3 Pqlc1-207ENSMUST00000140594 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcb1Q9Z0H3 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcb1Q9Z0H3 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcb1Q9Z0H3 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Smarcb1Q9Z0H3 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 Gm715-201ENSMUST00000117865 831 ntBASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 Josd2-203ENSMUST00000118493 922 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 Gm29241-201ENSMUST00000189260 1096 ntBASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 Gm18025-201ENSMUST00000221733 862 ntBASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 Gm45560-201ENSMUST00000211492 1472 ntBASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Smarcb1Q9Z0H3 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Smarcb1Q9Z0H3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.62
Smarcb1Q9Z0H3 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcb1Q9Z0H3 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC18.89■□□□□ 0.61
Smarcb1Q9Z0H3 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC18.89■□□□□ 0.61
Smarcb1Q9Z0H3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC18.89■□□□□ 0.61
Smarcb1Q9Z0H3 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcb1Q9Z0H3 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC18.89■□□□□ 0.61
Smarcb1Q9Z0H3 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcb1Q9Z0H3 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcb1Q9Z0H3 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Smarcb1Q9Z0H3 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcb1Q9Z0H3 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcb1Q9Z0H3 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcb1Q9Z0H3 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcb1Q9Z0H3 Mir6982-201ENSMUST00000184354 68 ntBASIC18.88■□□□□ 0.61
Smarcb1Q9Z0H3 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.88■□□□□ 0.61
Smarcb1Q9Z0H3 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
Smarcb1Q9Z0H3 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC18.88■□□□□ 0.61
Smarcb1Q9Z0H3 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC18.88■□□□□ 0.61
Smarcb1Q9Z0H3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Smarcb1Q9Z0H3 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Smarcb1Q9Z0H3 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcb1Q9Z0H3 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcb1Q9Z0H3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Smarcb1Q9Z0H3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcb1Q9Z0H3 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC18.87■□□□□ 0.61
Smarcb1Q9Z0H3 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Smarcb1Q9Z0H3 Syt3-203ENSMUST00000120262 2096 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Smarcb1Q9Z0H3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms