Protein–RNA interactions for Protein: Q9WU84

Ccs, Copper chaperone for superoxide dismutase, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcsQ9WU84 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcsQ9WU84 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcsQ9WU84 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcsQ9WU84 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CcsQ9WU84 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
CcsQ9WU84 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcsQ9WU84 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CcsQ9WU84 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcsQ9WU84 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CcsQ9WU84 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcsQ9WU84 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcsQ9WU84 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
CcsQ9WU84 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcsQ9WU84 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CcsQ9WU84 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.14□□□□□ -0.15
CcsQ9WU84 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcsQ9WU84 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CcsQ9WU84 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
CcsQ9WU84 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.13□□□□□ -0.15
CcsQ9WU84 Serp2-204ENSMUST00000228055 705 ntBASIC14.13□□□□□ -0.15
CcsQ9WU84 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.13□□□□□ -0.15
CcsQ9WU84 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Gm6139-201ENSMUST00000079261 882 ntBASIC14.13□□□□□ -0.15
CcsQ9WU84 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.13□□□□□ -0.15
CcsQ9WU84 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
CcsQ9WU84 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CcsQ9WU84 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC14.12□□□□□ -0.15
CcsQ9WU84 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcsQ9WU84 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC14.12□□□□□ -0.15
CcsQ9WU84 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
CcsQ9WU84 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcsQ9WU84 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC14.12□□□□□ -0.15
CcsQ9WU84 Bag1-204ENSMUST00000215842 1068 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcsQ9WU84 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcsQ9WU84 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcsQ9WU84 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CcsQ9WU84 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.12□□□□□ -0.15
CcsQ9WU84 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcsQ9WU84 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcsQ9WU84 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CcsQ9WU84 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcsQ9WU84 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcsQ9WU84 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CcsQ9WU84 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CcsQ9WU84 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CcsQ9WU84 Mir7075-201ENSMUST00000184187 82 ntBASIC14.11□□□□□ -0.15
CcsQ9WU84 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.11□□□□□ -0.15
CcsQ9WU84 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcsQ9WU84 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
CcsQ9WU84 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcsQ9WU84 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcsQ9WU84 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcsQ9WU84 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CcsQ9WU84 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcsQ9WU84 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CcsQ9WU84 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC14.1□□□□□ -0.15
CcsQ9WU84 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcsQ9WU84 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC14.1□□□□□ -0.15
CcsQ9WU84 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.1□□□□□ -0.15
CcsQ9WU84 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CcsQ9WU84 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcsQ9WU84 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CcsQ9WU84 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CcsQ9WU84 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcsQ9WU84 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC14.1□□□□□ -0.15
CcsQ9WU84 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcsQ9WU84 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcsQ9WU84 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcsQ9WU84 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcsQ9WU84 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CcsQ9WU84 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcsQ9WU84 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcsQ9WU84 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcsQ9WU84 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcsQ9WU84 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CcsQ9WU84 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcsQ9WU84 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcsQ9WU84 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CcsQ9WU84 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CcsQ9WU84 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CcsQ9WU84 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CcsQ9WU84 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms