Protein–RNA interactions for Protein: Q9QUM7

Msh5, MutS protein homolog 5, mousemouse

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh5Q9QUM7 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh5Q9QUM7 Spc24-205ENSMUST00000217382 1696 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Msh5Q9QUM7 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
Msh5Q9QUM7 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC18.59■□□□□ 0.57
Msh5Q9QUM7 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Msh5Q9QUM7 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
Msh5Q9QUM7 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh5Q9QUM7 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh5Q9QUM7 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC18.58■□□□□ 0.57
Msh5Q9QUM7 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh5Q9QUM7 Hdgfl3-201ENSMUST00000026094 2865 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh5Q9QUM7 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC18.58■□□□□ 0.57
Msh5Q9QUM7 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Msh5Q9QUM7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh5Q9QUM7 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh5Q9QUM7 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
Msh5Q9QUM7 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.58■□□□□ 0.56
Msh5Q9QUM7 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.58■□□□□ 0.56
Msh5Q9QUM7 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh5Q9QUM7 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh5Q9QUM7 Zfp692-201ENSMUST00000049353 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh5Q9QUM7 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh5Q9QUM7 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh5Q9QUM7 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC18.58■□□□□ 0.56
Msh5Q9QUM7 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Msh5Q9QUM7 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
Msh5Q9QUM7 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC18.57■□□□□ 0.56
Msh5Q9QUM7 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Msh5Q9QUM7 Gm8495-201ENSMUST00000188740 694 ntBASIC18.57■□□□□ 0.56
Msh5Q9QUM7 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
Msh5Q9QUM7 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
Msh5Q9QUM7 Trpc4ap-202ENSMUST00000103140 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh5Q9QUM7 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
Msh5Q9QUM7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
Msh5Q9QUM7 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh5Q9QUM7 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.56■□□□□ 0.56
Msh5Q9QUM7 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh5Q9QUM7 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh5Q9QUM7 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
Msh5Q9QUM7 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC18.56■□□□□ 0.56
Msh5Q9QUM7 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.56■□□□□ 0.56
Msh5Q9QUM7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
Msh5Q9QUM7 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
Msh5Q9QUM7 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh5Q9QUM7 Gnas-208ENSMUST00000109087 1716 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh5Q9QUM7 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh5Q9QUM7 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC18.55■□□□□ 0.56
Msh5Q9QUM7 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh5Q9QUM7 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.55■□□□□ 0.56
Msh5Q9QUM7 Gm18671-201ENSMUST00000214826 683 ntBASIC18.55■□□□□ 0.56
Msh5Q9QUM7 Zcchc13-201ENSMUST00000033692 1085 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
Msh5Q9QUM7 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh5Q9QUM7 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC18.55■□□□□ 0.56
Msh5Q9QUM7 Tymp-201ENSMUST00000023285 2037 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh5Q9QUM7 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Msh5Q9QUM7 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Msh5Q9QUM7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC18.55■□□□□ 0.56
Msh5Q9QUM7 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh5Q9QUM7 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh5Q9QUM7 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Msh5Q9QUM7 Gm10033-202ENSMUST00000211874 928 ntBASIC18.54■□□□□ 0.56
Msh5Q9QUM7 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.54■□□□□ 0.56
Msh5Q9QUM7 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh5Q9QUM7 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh5Q9QUM7 Fez2-201ENSMUST00000070039 1939 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh5Q9QUM7 Fam222a-201ENSMUST00000043650 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh5Q9QUM7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Msh5Q9QUM7 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Msh5Q9QUM7 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC18.53■□□□□ 0.56
Msh5Q9QUM7 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh5Q9QUM7 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh5Q9QUM7 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh5Q9QUM7 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Msh5Q9QUM7 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Msh5Q9QUM7 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC18.53■□□□□ 0.56
Msh5Q9QUM7 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.53■□□□□ 0.56
Msh5Q9QUM7 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh5Q9QUM7 AC154634.3-201ENSMUST00000224589 736 ntBASIC18.53■□□□□ 0.56
Msh5Q9QUM7 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh5Q9QUM7 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh5Q9QUM7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
Msh5Q9QUM7 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Msh5Q9QUM7 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh5Q9QUM7 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh5Q9QUM7 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Msh5Q9QUM7 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.53■□□□□ 0.56
Msh5Q9QUM7 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Msh5Q9QUM7 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh5Q9QUM7 Gm44832-201ENSMUST00000208849 2303 ntBASIC18.52■□□□□ 0.56
Msh5Q9QUM7 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh5Q9QUM7 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh5Q9QUM7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
Msh5Q9QUM7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh5Q9QUM7 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Msh5Q9QUM7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Msh5Q9QUM7 Gm13146-201ENSMUST00000118508 780 ntBASIC18.52■□□□□ 0.56
Msh5Q9QUM7 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Msh5Q9QUM7 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC18.52■□□□□ 0.56
Msh5Q9QUM7 Gm21868-201ENSMUST00000185623 1230 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Msh5Q9QUM7 Gm20803-202ENSMUST00000190968 1230 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms