Protein–RNA interactions for Protein: Q9EQG9

Col4a3bp, Collagen type IV alpha-3-binding protein, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a3bpQ9EQG9 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a3bpQ9EQG9 Fst-202ENSMUST00000223640 2612 ntBASIC20.92■□□□□ 0.94
Col4a3bpQ9EQG9 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a3bpQ9EQG9 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a3bpQ9EQG9 Gm5297-201ENSMUST00000198555 1171 ntBASIC20.92■□□□□ 0.94
Col4a3bpQ9EQG9 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC20.92■□□□□ 0.94
Col4a3bpQ9EQG9 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a3bpQ9EQG9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a3bpQ9EQG9 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Col4a3bpQ9EQG9 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC20.92■□□□□ 0.94
Col4a3bpQ9EQG9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a3bpQ9EQG9 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a3bpQ9EQG9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a3bpQ9EQG9 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a3bpQ9EQG9 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a3bpQ9EQG9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC20.91■□□□□ 0.94
Col4a3bpQ9EQG9 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.91■□□□□ 0.94
Col4a3bpQ9EQG9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a3bpQ9EQG9 Gm5828-201ENSMUST00000071842 1860 ntBASIC20.91■□□□□ 0.94
Col4a3bpQ9EQG9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a3bpQ9EQG9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Col4a3bpQ9EQG9 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Col4a3bpQ9EQG9 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a3bpQ9EQG9 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
Col4a3bpQ9EQG9 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a3bpQ9EQG9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Col4a3bpQ9EQG9 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Col4a3bpQ9EQG9 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Col4a3bpQ9EQG9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Col4a3bpQ9EQG9 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Col4a3bpQ9EQG9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Col4a3bpQ9EQG9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
Col4a3bpQ9EQG9 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Col4a3bpQ9EQG9 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC20.89■□□□□ 0.93
Col4a3bpQ9EQG9 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
Col4a3bpQ9EQG9 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC20.89■□□□□ 0.93
Col4a3bpQ9EQG9 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
Col4a3bpQ9EQG9 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col4a3bpQ9EQG9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col4a3bpQ9EQG9 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a3bpQ9EQG9 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a3bpQ9EQG9 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a3bpQ9EQG9 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a3bpQ9EQG9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Col4a3bpQ9EQG9 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Col4a3bpQ9EQG9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a3bpQ9EQG9 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a3bpQ9EQG9 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Col4a3bpQ9EQG9 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a3bpQ9EQG9 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a3bpQ9EQG9 Gm45606-201ENSMUST00000209836 2795 ntBASIC20.88■□□□□ 0.93
Col4a3bpQ9EQG9 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col4a3bpQ9EQG9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a3bpQ9EQG9 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Col4a3bpQ9EQG9 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a3bpQ9EQG9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Col4a3bpQ9EQG9 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.87■□□□□ 0.93
Col4a3bpQ9EQG9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.87■□□□□ 0.93
Col4a3bpQ9EQG9 Gm12933-201ENSMUST00000120203 872 ntBASIC20.87■□□□□ 0.93
Col4a3bpQ9EQG9 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
Col4a3bpQ9EQG9 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a3bpQ9EQG9 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col4a3bpQ9EQG9 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a3bpQ9EQG9 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a3bpQ9EQG9 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a3bpQ9EQG9 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a3bpQ9EQG9 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Col4a3bpQ9EQG9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC20.86■□□□□ 0.93
Col4a3bpQ9EQG9 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC20.86■□□□□ 0.93
Col4a3bpQ9EQG9 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a3bpQ9EQG9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a3bpQ9EQG9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a3bpQ9EQG9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a3bpQ9EQG9 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col4a3bpQ9EQG9 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a3bpQ9EQG9 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a3bpQ9EQG9 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a3bpQ9EQG9 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a3bpQ9EQG9 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a3bpQ9EQG9 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Col4a3bpQ9EQG9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a3bpQ9EQG9 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
Col4a3bpQ9EQG9 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Col4a3bpQ9EQG9 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.85■□□□□ 0.93
Col4a3bpQ9EQG9 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a3bpQ9EQG9 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a3bpQ9EQG9 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a3bpQ9EQG9 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col4a3bpQ9EQG9 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a3bpQ9EQG9 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a3bpQ9EQG9 Fam213a-201ENSMUST00000022317 1537 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a3bpQ9EQG9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a3bpQ9EQG9 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC20.84■□□□□ 0.93
Col4a3bpQ9EQG9 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a3bpQ9EQG9 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a3bpQ9EQG9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col4a3bpQ9EQG9 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC20.84■□□□□ 0.93
Col4a3bpQ9EQG9 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC20.84■□□□□ 0.93
Col4a3bpQ9EQG9 Gm10602-201ENSMUST00000098239 609 ntBASIC20.84■□□□□ 0.93
Col4a3bpQ9EQG9 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms