Protein–RNA interactions for Protein: Q9DB85

Rrp8, Ribosomal RNA-processing protein 8, mousemouse

Known RBP Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrp8Q9DB85 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rrp8Q9DB85 Gm10175-202ENSMUST00000208752 441 ntBASIC17.9■□□□□ 0.46
Rrp8Q9DB85 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.9■□□□□ 0.46
Rrp8Q9DB85 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.9■□□□□ 0.46
Rrp8Q9DB85 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rrp8Q9DB85 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC17.9■□□□□ 0.46
Rrp8Q9DB85 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rrp8Q9DB85 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rrp8Q9DB85 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rrp8Q9DB85 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rrp8Q9DB85 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Rrp8Q9DB85 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Rrp8Q9DB85 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Rrp8Q9DB85 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rrp8Q9DB85 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Rrp8Q9DB85 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rrp8Q9DB85 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rrp8Q9DB85 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.89■□□□□ 0.45
Rrp8Q9DB85 Gm42545-201ENSMUST00000202755 922 ntBASIC17.89■□□□□ 0.45
Rrp8Q9DB85 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.89■□□□□ 0.45
Rrp8Q9DB85 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
Rrp8Q9DB85 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
Rrp8Q9DB85 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rrp8Q9DB85 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rrp8Q9DB85 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rrp8Q9DB85 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Gm45560-201ENSMUST00000211492 1472 ntBASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Vrk1-202ENSMUST00000072040 1509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rrp8Q9DB85 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rrp8Q9DB85 Zdhhc1-201ENSMUST00000044286 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rrp8Q9DB85 Alg1-202ENSMUST00000100196 1755 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rrp8Q9DB85 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rrp8Q9DB85 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rrp8Q9DB85 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rrp8Q9DB85 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rrp8Q9DB85 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Rrp8Q9DB85 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rrp8Q9DB85 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rrp8Q9DB85 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rrp8Q9DB85 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rrp8Q9DB85 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rrp8Q9DB85 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
Rrp8Q9DB85 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
Rrp8Q9DB85 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
Rrp8Q9DB85 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rrp8Q9DB85 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rrp8Q9DB85 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
Rrp8Q9DB85 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Rrp8Q9DB85 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rrp8Q9DB85 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.86■□□□□ 0.45
Rrp8Q9DB85 Gm38285-201ENSMUST00000192928 922 ntBASIC17.86■□□□□ 0.45
Rrp8Q9DB85 Gm21814-202ENSMUST00000203277 873 ntBASIC17.86■□□□□ 0.45
Rrp8Q9DB85 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rrp8Q9DB85 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rrp8Q9DB85 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rrp8Q9DB85 Ap2m1-202ENSMUST00000090023 2080 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rrp8Q9DB85 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Rrp8Q9DB85 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rrp8Q9DB85 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Rrp8Q9DB85 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
Rrp8Q9DB85 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Rrp8Q9DB85 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Rrp8Q9DB85 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rrp8Q9DB85 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC17.85■□□□□ 0.45
Rrp8Q9DB85 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rrp8Q9DB85 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC17.85■□□□□ 0.45
Rrp8Q9DB85 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC17.85■□□□□ 0.45
Rrp8Q9DB85 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC17.85■□□□□ 0.45
Rrp8Q9DB85 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rrp8Q9DB85 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rrp8Q9DB85 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rrp8Q9DB85 Esco1-202ENSMUST00000097670 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rrp8Q9DB85 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.85■□□□□ 0.45
Rrp8Q9DB85 Ntn1-201ENSMUST00000021284 5738 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Rrp8Q9DB85 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rrp8Q9DB85 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rrp8Q9DB85 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.84■□□□□ 0.45
Rrp8Q9DB85 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rrp8Q9DB85 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rrp8Q9DB85 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rrp8Q9DB85 Gm12382-201ENSMUST00000122005 922 ntBASIC17.84■□□□□ 0.45
Rrp8Q9DB85 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rrp8Q9DB85 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Rrp8Q9DB85 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms